Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq101 242 4e-59 seq147 141 1e-28 seq118 105 7e-18 >seq101 Length=4191135 Score = 242 bits (268), Expect = 4e-59 Identities = 520/764 (68%), Gaps = 26/764 (3%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | |||||| ||||| || | ||| ||| ||||| ||| Sbjct 2588883 TCATGCGTGTGTCCGTTGGTATCTGGGGTGATGATATCGAGCGAGTCTTGGAGACATACA 2588942 Query 53253 ACTTAATGAGCCAA--AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 || | ||| ||| |||| ||| || || || | || || || ||||| || ||||| Sbjct 2588943 ACCTGATGT--CAAGCAAGTTCTTCACACATGCTTCCCCCACGCTCTTCAATGCCGGTAC 2589000 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 ||| || ||| |||| |||||| |||| | |||||||| ||| || || || Sbjct 2589001 CCCTCAGCCCCAGTTGTCATCTTGCTTCTTGGTTGATATGAAGGACGACAGTATTGAGGG 2589060 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 |||||||| || |||||| |||||| ||||||||| | | |||||||| ||| | Sbjct 2589061 AATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCT 2589120 Query 53431 CCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCG 53486 | ||| | | | ||||||| | ||| || ||| || || ||||| | ||| Sbjct 2589121 GAATGTGCACCGTA--TCCGTGCTACTGGCTCATACATCGCCGGTACCAACGGTACATCG 2589178 Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGG 53546 | || | || |||||||| || |||||||||||||| || ||||| ||| |||||| Sbjct 2589179 A--ACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGGTATGTCGACCAGG 2589236 Query 53547 GTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTA 53606 |||| ||||| || | || ||||||||||||||||| |||||| | || | Sbjct 2589237 GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACTCTGATGTCT 2589296 Query 53607 TGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666 | ||||| || || || ||| ||| || ||| | || ||| | || ||||||||| | Sbjct 2589297 TCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCCGTGCCCGTGACCTTT 2589356 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 || || || ||||| || || || |||||| | || || ||| ||| || ||| Sbjct 2589357 TTCTTGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAACGGTGACTGGA 2589416 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTTAAC 53785 |||||||||| ||||||||||| |||| | | | || |||||| |||||||| | Sbjct 2589417 CATTGATGTGCCCCAACGAGTGCCCTGGCCTTGCCGACTG-CTACGGAGAGGAGTTCGAG 2589475 Query 53786 GAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG------AAGAAGGTCAAGGCG 53839 | |||| | ||||| || | ||| | |||| |||| | ||||||| Sbjct 2589476 GCTCTGTACGAAAAGTACG-AG---AAGGCGG--GCAAGGGTCGAAAGACGATCAAGGCT 2589529 Query 53840 CGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC 53899 | || | ||| | || || || || |||| ||||| |||| || | |||| | Sbjct 2589530 CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACCCCTTCATGCTC 2589589 Query 53900 TACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 ||||||||| | |||| ||||| ||||| |||||| |||| Sbjct 2589590 TACAAGGATGCCTGCAACCGCAAGAGTAACCAAAAGAACCTCGG 2589633 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||| ||||| | ||| || ||||||||||| ||||||||| |||| || | || Sbjct 2590459 TGCTGATCGAGGTGCCTTCATTGATCAGTCCCAGTCACTGAACATCCACATGAAGGACCC 2590518 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | ||| |||| | | | ||||||||| || |||||| || |||||||| || Sbjct 2590519 CACGATGGGCAAGATCACCAGTATGCACTTTGCAGGCTGGAAGCTTGGCCTCAAGACTGG 2590578 Query 55906 TATGTACTATCTGCGGAC 55923 |||||||| || || || Sbjct 2590579 CATGTACTACCTTCGTAC 2590596 >seq147 Length=2083461 Score = 141 bits (156), Expect = 1e-28 Identities = 210/296 (71%), Gaps = 4/296 (1%) Strand=Plus/Plus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || |||||||| ||||||||| || |||||||| ||||||||||| || | |||| Sbjct 1845486 AGCCGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCG 1845545 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | |||||| || |||| || | |||||| | || |||||||| || |||| | Sbjct 1845546 AAGTTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGG 1845605 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 | || || |||||| | ||||| ||||| || || |||||||| | || Sbjct 1845606 CCAATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACA 1845665 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || |||| | | | |||||| |||| ||||| | ||| |||||| |||||||| Sbjct 1845666 TAACCAGCCAATTCAACGACCTTCTTGTCTTTGACG--ATGTTTCTCTTGAAGCAGGCAT 1845723 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGC 117592 | || ||||| ||||||| ||||| | |||||| ||| ||||| || ||| Sbjct 1845724 ATATGACCTTACGCTGACCGGGCTTGAAGCCATCCAGCACCGAGGGGATGGATCGC 1845779 Score = 82.4 bits (90), Expect = 8e-11 Identities = 183/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085 || |||||| |||| || | ||||| ||||| ||||| || || || | || || Sbjct 1845489 CGAGTGAAGGTGTAACGAGGACTGGCAGCATCAGATCCACCAGCAAGTCGAGAACCGAAG 1845548 Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145 | |||| ||| || || |||| |||||| | || || || ||||| |||| Sbjct 1845549 TTTCCACTGGGTTCCAGACAATTGATGTTGTTTGAACCAACAAAGTTCTGGGCCAGGCCA 1845608 Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205 | || || || ||| | |||||||||||| || || |||||||| | || || Sbjct 1845609 ATGATAGTCTGTTGGAGAGACTGTTCACCGTGGTGGTAGGCAGTCTGCTCAGAGACATAA 1845668 Query 152206 CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 || ||||| | | |||||| |||| | | ||| |||||| ||||| || || Sbjct 1845669 CCAGCCAATTCAACGACCTTCTTGTCTTTGACGATGTTTCTCTTGAAGCAGGCATATATG 1845728 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 ||||| ||||| || || || || |||| ||| Sbjct 1845729 ACCTTACGCTGACCGGGCTTGAAGCCATCCAGCAC 1845763 >seq118 Length=2030615 Score = 105 bits (116), Expect = 7e-18 Identities = 533/824 (65%), Gaps = 54/824 (7%) Strand=Plus/Plus Query 74472 ACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGAAA 74531 || ||||| || || ||||||||||| || | | |||||||| ||||| ||||||| Sbjct 1883149 ACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTTTCCATGAAGTCGAAG 1883208 Query 74532 GGGTTCTTTGCACCGTAAATAGGCTTCTCCC--CAAACTGTG-CCATGAGGCGATCCGCC 74588 ||||| | || ||| | |||||| | || | | ||| ||| ||||| || Sbjct 1883209 GGGTTGGTGGCCTTGTAGAC---CTTCTCGTTGCCAAGAGCGACCAGGAGACGATCAGCG 1883265 Query 74589 ACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCACGGCAGT 74648 || || | |||||||||| |||| | | | |||||||| ||| || || || Sbjct 1883266 ACGAACTCAATGTACTGCTTCATGAGGTCAGAGTTCATGCCGAGGAGGGCACAGGGAAGG 1883325 Query 74649 GCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC--CATTGGACA-ATCTTGTGA--A 74703 ||||| |||| ||||| || | || | | | || || | |||||| || | Sbjct 1883326 GCCTCAGTGAGGAACTC-CTGTTCAATGGTGACGGCATCAGTGATGATATCTTG-GATCA 1883383 Query 74704 TGT-CTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCC 74759 | | ||| ||| | ||| ||| |||||||||| || | || |||||| || Sbjct 1883384 TCTGCTTGCTGGCACGGCCCTTG------AGGTGAGAGTGGAGGAGGCA-GGCAAAGTCA 1883436 Query 74760 TGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGT 74819 || || || || | || | || || || || | || |||||||| || Sbjct 1883437 GTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTCAGACCAGGCATGAGA 1883496 Query 74820 CCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACA 74879 ||||||||||| | ||| || || | | ||||| ||||||||||||||| || || ||| Sbjct 1883497 CCACGCTTCTTGAGCCAGAAAATAGAAGCGAAGGCACCACTGAAGAAGATACCCTCAACA 1883556 Query 74880 CACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTG 74935 || || || || || || || || || | | || | || ||||| || | Sbjct 1883557 GCAGCGAAAGCAACCAGACGCTGGGCAAAGGAGGAGTCCTTA-TCTTGGATCCA--TCGG 1883613 Query 74936 A--GCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGGCT 74992 | ||||| ||||| ||| || | |||||| | || || || || | ||||||| Sbjct 1883614 ATGGCCCAGTCAGC-CTTCTTTCGGATGCAGGGAATGGTCTCAATGGCGTTGAAGAGG-- 1883670 Query 74993 TGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAA 75050 | | ||| || | || ||||||| | |||| || | || ||||| ||||| || Sbjct 1883671 TACGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAG 1883730 Query 75051 TGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACA 75110 ||||| ||| | | |||| | |||||||| | || ||||| | ||||| || Sbjct 1883731 TGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGATCTGGACC 1883790 Query 75111 T--CCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAA 75168 | || |||| || | ||| ||||| |||| || || || ||||| ||||| | Sbjct 1883791 TCGCCACTGAATCGCTC--GACGAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGA 1883848 Query 75169 AAGCCAGTACCATTTTGATA----AAGTGGCGCTCATCGTCAGT---GAGTTTGTCCCAA 75221 |||| || | | ||| | ||| |||||||| |||| | | |||| ||| Sbjct 1883849 AAGCAAG----AATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCCAG 1883904 Query 75222 TCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | || ||| | || ||||||||||| | |||||||| Sbjct 1883905 TCGTGGAGATCCTTGGACAGGTCAATCTCCTCAGCAGTCCAGAA 1883948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214262589200