Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq225 176 1e-38 seq143 170 4e-37 seq89 138 3e-27 seq101 109 1e-18 >seq225 Length=1293757 Score = 176 bits (194), Expect = 1e-38 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || |||||||| || || ||||| | ||||| Sbjct 459260 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 459201 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || |||||||| || | || ||||||||| Sbjct 459200 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 459141 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 459140 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 459081 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 459080 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 459046 >seq143 Length=3159380 Score = 170 bits (188), Expect = 4e-37 Identities = 173/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||||| || || ||||| ||||| ||||| || |||||||| || || | ||||| Sbjct 2351242 ACGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAAGG- 2351184 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | |||||||||| |||||| || ||||||||||| || || || ||||| || | | Sbjct 2351183 TGCGACCATCTTCCAACTGCTTACCAGCGAAGATAAGACGCTGCTGATCAGGGGGGATAC 2351124 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 | ||||| ||||| ||||| |||||||| ||||| |||||| |||||||| | Sbjct 2351123 CCTCCTTATCCTGAATCTTGCTCTTCACGTTGTCGATAGTGTCACTAGACTCAACCTCAA 2351064 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| |||||||| ||||||||||| || || | |||||| Sbjct 2351063 GGGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 2351021 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||| || || || || |||||||| || || |||||||| | || ||| Sbjct 2350776 AGGACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCT 2350717 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| |||||||| || || || || || || |||||||| || | || ||||||||| Sbjct 2350716 TCCAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 2350657 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| ||||| || ||||| |||||||| ||| Sbjct 2350656 TGGATCTTCGACTTAACATTGTCGATGGTATCAGACGACTCGACCTCAAGAGTGATGGTC 2350597 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 2350596 TTGCCAGTGAGGGTCTTGAC 2350577 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| |||||||||||||| || || ||||| ||||| | || || | || || Sbjct 2350494 AGAACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCC 2350435 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || | |||||| ||||| || || | || ||||||||| Sbjct 2350434 TCAAGCTGCTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 2350375 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 2350374 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 2350315 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 2350314 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2350283 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| ||||| || || || || ||||| || || | ||| || Sbjct 2351014 ACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGT 2350955 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || |||||||| || ||||| || || |||||||| ||||||| || Sbjct 2350954 TCGACCATCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGGTCCGGAGGAATACC 2350895 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||||| || || |||||||| || || || || || Sbjct 2350894 CTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTGTCGGATGACTCGACTTCCAG 2350835 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| |||||||| || || ||||| || || | ||||| Sbjct 2350834 AGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATTTGCAT 2350793 >seq89 Length=2234088 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | ||||| || || ||||| || |||||||| Sbjct 1543920 TTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGTTGCTTACCAGCGAAGATC 1543861 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || |||||||| || |||| ||| ||||||||||||||||| || || || ||| Sbjct 1543860 AGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1543801 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 1543800 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1543742 >seq101 Length=4191135 Score = 109 bits (120), Expect = 1e-18 Identities = 196/280 (70%), Gaps = 11/280 (4%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||||||||| ||||| | |||| |||||| ||||| |||||||| |||| Sbjct 2589628 GTTCTTTTGGTTACTCTTGCGGTTGCA---GGCATCCTTGTAGAGCATGAAGGGGTTTCC 2589572 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| || ||| | |||||| | |||||||| ||| || || |||||| Sbjct 2589571 GGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATCGTCTTTCG 2589512 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | || || | ||||||||||||| ||| || ||||||| ||| ||| ||| || Sbjct 2589511 ACCCTTGCCCGCCTTCTCGTACTTTTCGTACAGAGCCTCGAACTCCTCTCCGTAGCAGTC 2589452 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCG-TCTTCCTTC-ACT 178327 | || || || ||| |||||||| | | |||| | |||| |||| ||| || Sbjct 2589451 GGCAAGGCCAGGGCACTCGTTGGGGCACATCAATGTCCAGTCACCGTTCTT--TTCAACA 2589394 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 || |||||||| || |||| | |||| | |||| |||||| Sbjct 2589393 CGCTTCATGAAAAGATCAGGGATCCAAAGGGCA-AGAAAA 2589355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148227684710