Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq143 104 2e-17 seq225 95.1 8e-15 >seq143 Length=3159380 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| ||||| ||||| || | Sbjct 2350283 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 2350342 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| ||||| || || | || || || || Sbjct 2350343 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 2350402 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || ||||||||||| || || || |||| |||||| | ||||||||| Sbjct 2350403 CAACGCTTGATTTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAAC 2350462 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || |||||||| | ||| | ||| Sbjct 2350463 ATTCAGAAGGAGTCCACTCTTCATCTTGTT 2350492 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| ||||| || ||||| || || ||||| || | Sbjct 2351021 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTTGAGTCTAGT 2351080 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| || || || ||| | || || ||||| Sbjct 2351081 GACACTATCGACAACGTGAAGAGCAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCAG 2351140 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||||| | ||||| || |||| |||||| Sbjct 2351141 CAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTGAGCGACTACAAC 2351200 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2351201 ATCCAGAAGGAGTCAAC 2351217 Score = 89.7 bits (98), Expect = 3e-13 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || |||||||| || || || |||||||| || || || || | || || | | Sbjct 2350575 TCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCTGATACCATCG 2350634 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | ||| |||| | || | | ||||| || ||| | || || || || |||||| | Sbjct 2350635 ACAATGTTAAGTCGAAGA-TCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTG 2350693 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || ||||| ||||| ||||||||||||| || || | | ||| |||||||| || || Sbjct 2350694 ATTTTTGCTGGCAAGCAACTGGAAGACGGCCGAACCCTTGCCGACTACAACATCCAGAAG 2350753 Query 23800 GAGTCCAC 23807 || || || Sbjct 2350754 GAATCTAC 2350761 >seq225 Length=1293757 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||||||||| || |||||||| || || || || || Sbjct 459046 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 459105 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || ||||| || || | || || || Sbjct 459106 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 459165 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||||| | || ||||| ||||| || || || || | ||||| | |||| ||| Sbjct 459166 CAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 459225 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || || |||||||| Sbjct 459226 AACATCCAGAAGGAGTCCAC 459245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008553649032