Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20mangiferae_20[genbank_20GCA_5F900044065.1_202016-12-06] 254 sequences; 46,292,722 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq85 84.2 2e-11 >seq85 Length=4752789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 196/291 (67%), Gaps = 11/291 (4%) Strand=Plus/Plus Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084 ||||||||||| || | | || |||||| ||||| || | |||| | || ||| || Sbjct 1193207 TGAGGGTCGTAGCCGTTAATGGTGAAATCTTCTGCTTTCCATCCGTCGATACT-TCCGCC 1193265 Query 27085 CTCCTGTTT------ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTC 27138 || ||| | || || ||| ||| || ||||| | ||| | ||||| Sbjct 1193266 CT--TGTCTCGAGAAATTTCCAACTCGGGGAAGTTTCGTGGCTCACGCTCTAATTGAGTG 1193323 Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAA-ACTC 27197 || || | || |||||||| ||||| || ||||| || |||| | || || ||| Sbjct 1193324 TTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGAGTAAGACT- 1193382 Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257 ||| || ||||| | || || || | ||||| || | || | |||||||||||| Sbjct 1193383 TCCAGGAACTAGCTCACAAACATGGGCAAGCATGTGGGTCAACAGCGCGTAGCTGGCGAT 1193442 Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 ||| ||||| || || | ||||| || | ||||| || || |||||||| Sbjct 1193443 GTTGAAGGGAACTCCCAAACCCATATCGCAAGACCTTTGATATAGCTGACA 1193493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506056144274