Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq37 114 1e-20
>seq37
Length=309367
Score = 114 bits (126), Expect = 1e-20
Identities = 198/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || ||||| || || | ||| |||| ||||| |||||||| || |||||
Sbjct 135846 ATGTAGGTATCGATGAGGAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGG 135905
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| |||||||||||||||||||| | || || || || || ||||| || | ||
Sbjct 135906 AAACCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAATCGCTCAACAAGA 135965
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
|||||||| ||||| ||||| ||||| || || || | ||||| ||||| |||
Sbjct 135966 TTCTCATTGACGATGCCGTCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGATGAAGTAT 136025
Query 16652 TTTTCGTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
| ||||| || || | | | | ||| || | | ||| ||||| | ||| | ||
Sbjct 136026 TGCTCGTCTGAAGTCAATCGGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCGATCTCC 136085
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|| | ||||| ||| ||| ||||||| || ||||||| ||| ||
Sbjct 136086 TCAGCTGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATTTGCCAGAT 136132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410078548320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |