Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq495 104 3e-17 >seq495 Length=49236 Score = 104 bits (114), Expect = 3e-17 Identities = 402/636 (63%), Gaps = 43/636 (7%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 || |||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 36935 AGTTGGACCTTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 36994 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || || | || | || ||| || | ||||| |||||||| | |||| Sbjct 36995 GTAAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 37054 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| |||||||| | || || || || | ||| ||| Sbjct 37055 CTAGCAATGTTGAAGGGAACGCCCAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 37114 Query 145852 -GA------------------------GAGCTCCCCGCC--------------CGCCACG 145872 || ||| || | || | ||| Sbjct 37115 TGAAGGTGTCCTTGGGGCTTCGCCTCTGAGTTCTCGTCCTTGCTTCGGGGATAGGATACG 37174 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||| | | ||| || ||||| || |||| || ||| || |||||| Sbjct 37175 TAGAACTGGGCAAACATGTGACAAGGCGGTAGAACCATCTTCTTCATGTCGGCAGGGTTC 37234 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992 ||||| | || || | | | | | ||||| | | || || | || Sbjct 37235 CAGGCAGAAAGAACTAAGCGGCGGTCATAAGGGTTGGTTCGTAGCTTGTGAATGATCTCG 37294 Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCG 146052 |||||||| |||||||| || ||||||||||||| || |||||| | || || Sbjct 37295 GCAAGCTGGTCTACGCCCTGGCCGGTATAATCTGTCTTGGCATCGACGTACTCAGCGCCA 37354 Query 146053 AAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGC 146112 ||||||| ||| ||||| ||||| || || || ||||| ||| ||| | || || Sbjct 37355 AAGTGCCGCCATTGGAAGCCGTATACAGGACCTAGGTCGCCGACCTCACGATGTTGAAGA 37414 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170 || |||| || || || || ||||| | ||||||||||||| || |||| Sbjct 37415 CCAAGGTTATCGAGAAATTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCA 37474 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | |||| ||| ||||| ||| ||| ||||||||||| ||||| | | ||| Sbjct 37475 CTGAGA-CTC-TTGGAAGAGGTGTTACCCTCAATGAACCAGAGGAGCTCGGCAATGACGG 37532 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | |||||| | ||| ||||| || ||||||| Sbjct 37533 CGCGAGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 37568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071813851040