Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq433 122 8e-23 seq22 111 1e-19 seq403 104 2e-17 >seq433 Length=46257 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||||||| ||||| ||||||| Sbjct 40709 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 40768 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || |||||||| || || || || ||||||||||| Sbjct 40769 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 40828 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| ||||| | ||| | ||| || Sbjct 40829 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 40888 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || |||||||||||| Sbjct 40889 CCCGTGAGGGTCTTGACGAAAATCTGCATG 40918 >seq22 Length=419152 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| |||||||||||| Sbjct 75162 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 75221 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| | || | ||||||||||| ||||| |||||||||||||| || || Sbjct 75222 CTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 75281 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||||| ||| | || ||||| || Sbjct 75282 GGACTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGT 75341 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||| Sbjct 75342 GAGGGTCTTGACGAAGATTTGCAT 75365 >seq403 Length=53939 Score = 104 bits (114), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | || || |||||||||||| || || ||| |||| Sbjct 265 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 206 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | ||||||||||| || || |||||||||||||| || || || || | ||| Sbjct 205 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 146 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730 | |||||||| ||||||||||| ||| | || ||||| ||||| || || || ||| Sbjct 145 ATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 86 Query 118731 ATCTGCATGGC 118741 ||| ||||| Sbjct 85 --CTGGATGGC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433826825779792