Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq643 262 4e-65
seq433 91.5 1e-13
>seq643
Length=117438
Score = 262 bits (290), Expect = 4e-65
Identities = 622/936 (66%), Gaps = 8/936 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| || || ||||| || || ||| || | || || || ||
Sbjct 47997 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 47938
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| | || || || | || | ||||| || || |||||||| ||||
Sbjct 47937 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCC 47878
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||| | || || ||| |
Sbjct 47877 TTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGC 47818
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGC 23265
||||||| | | | | | || ||| || ||| ||||||||||| ||||| ||
Sbjct 47817 TTCTGAGCCTTGATA-GACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 47759
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||||||| ||||||| ||||| || ||||| || ||| | || ||||||||| |
Sbjct 47758 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 47699
Query 23326 CCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382
||| | | | ||| || || || |||| |||||||| || ||||| ||||| |
Sbjct 47698 CCA---TTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAA 47642
Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442
|||||| || || ||||| |||||||| || ||| |||||| | ||| | || ||
Sbjct 47641 GAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTC 47582
Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502
|| ||||| || ||||| ||||| ||||| | ||| || || || |||| ||| || ||
Sbjct 47581 GAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACC 47522
Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562
||||| || |||||||| || ||||||||| |||| | ||||| || |||| ||||||
Sbjct 47521 ACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTT 47462
Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622
||| | || || || | || || | || || | ||| ||| ||
Sbjct 47461 GGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAA 47402
Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682
|| || || || || || || ||||| || || || || || |||||||| ||
Sbjct 47401 GCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACC 47342
Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742
|| ||||||||||| || | | || | ||| || || || | || | | || ||
Sbjct 47341 ATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGT 47282
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802
| |||| ||| | || ||||| || || || ||| | | ||||| || |||||
Sbjct 47281 ACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTA 47222
Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || | | | ||||| || || || || || | ||||| ||||| |||||
Sbjct 47221 TGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 47162
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
| || || | ||| | | ||||| ||| | | || ||||| | || ||
Sbjct 47161 ATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACAAGGT 47102
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATC 23958
| || |||||||||| ||||| ||||| |||||
Sbjct 47101 TCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATC 47066
Score = 100 bits (110), Expect = 3e-16
Identities = 223/331 (67%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298
|||| |||||| |||||| || || || || || || || ||||| | | ||| ||
Sbjct 48783 TTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA-CAACCTG 48725
Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358
| ||| || || ||||| || ||||||||||| | ||||||| || ||
Sbjct 48724 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGG 48666
Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418
||| |||||| || ||||||| ||||| || || || | |||| ||| |
Sbjct 48665 GGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAA 48606
Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478
||| ||| || | ||| |||| || |||| || || || |||||||| | |
Sbjct 48605 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAA 48546
Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538
||| ||||||||||| |||||||| ||| | || || || |||| ||||| || || |
Sbjct 48545 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAA 48486
Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGC 22569
|||| | || ||||| ||||| || ||
Sbjct 48485 TCTGCGAAGTACTGGCGGTAGGCATAGGAGC 48455
>seq433
Length=46257
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || || || || ||||||||| | || || || | ||
Sbjct 40918 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 40859
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||| || | || || |||||
Sbjct 40858 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 40799
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || ||||| || ||| | || || || ||||||| || ||
Sbjct 40798 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 40739
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || ||||| |||| ||
Sbjct 40738 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 40706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762633273920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |