Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq37 264 2e-65
seq643 109 8e-19
>seq37
Length=309367
Score = 264 bits (292), Expect = 2e-65
Identities = 573/847 (68%), Gaps = 29/847 (3%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||||||||| ||||| | || ||| |||||||
Sbjct 136132 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 136073
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | || |||||| | |||| | | || || ||
Sbjct 136072 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 136013
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|||||| | || ||||| || | |||||| || |||||||| || ||||| ||||| ||
Sbjct 136012 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAG-CG 135954
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
|||| ||| | || || |||| ||| ||||| || || ||||| |||||||
Sbjct 135953 ATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTATGGTTTCCAGATCATGA 135895
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG- 125315
| |||||| | ||||| |||| ||||| || || || | ||||| || ||
Sbjct 135894 TGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTG 135835
Query 125316 --CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
|| |||| | || ||||| ||||| | ||||| | || | || || || ||||
Sbjct 135834 CCCAGCGTACATAC---CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGG 135778
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
| | |||| || || |||||| | || | || ||| | | || | | || || |
Sbjct 135777 CGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTG 135718
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| || || ||||| ||||| |||||||| ||| ||||| ||||||| |||||||
Sbjct 135717 CTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCA 135658
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
||||||| || |||||||| || |||| ||||||| | || ||||| || ||||
Sbjct 135657 AGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 135598
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
| || ||| ||||||||| ||| || | ||| | | | | || | |
Sbjct 135597 GTCTTCACACCGACTTTGCCTGTCTCCT------CCACTCT---CACCTCAAGGGACGTG 135547
Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673
||||| | | | | || ||||| | ||||||||||| || || || |||||||
Sbjct 135546 CCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 135487
Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733
| || || | || || | || | |||||||||| ||| || ||| ||||||
Sbjct 135486 TTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACA 135427
Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGC--CG-CAAGATTTACAA 125788
| || || || || |||||||| || |||| | ||| || ||| | |||||
Sbjct 135426 TCGAATTCGTCGCTGATCGTCTCCT-----CGTTGCTCTCGGCAACGAGAAGGTGTACAA 135372
Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
||| || || || || |||||| | ||| || || | || || |||||||| ||
Sbjct 135371 GTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAAACCAACTTCTT 135312
Query 125849 CGAGAAG 125855
|||||||
Sbjct 135311 CGAGAAG 135305
>seq643
Length=117438
Score = 109 bits (120), Expect = 8e-19
Identities = 320/488 (66%), Gaps = 10/488 (2%)
Strand=Plus/Plus
Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923
|| |||||| ||||| || || || || || || || | ||| ||||| | || ||
Sbjct 47504 CGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCA 47563
Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983
|||||||| ||||| || || || | || | || || || || || ||||
Sbjct 47564 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTC 47623
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043
|| || | ||| |||| | || || ||| | || ||| | ||||||||||| ||| |
Sbjct 47624 CGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAG 47683
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
||| | |||| || |||||||| || | || || || | || ||||
Sbjct 47684 AGAAACGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTAC 47743
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163
|| || || |||||||| |||| |||||| |||||| || | | | |
Sbjct 47744 GGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGG----TAAGGGTCGCAA 47799
Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAA 97218
||| || | | |||| || ||| | ||||| | ||| ||| ||| |||||| ||||
Sbjct 47800 GTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACAGAGACCGGAA 47858
Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278
|| | ||| |||||||||||| | |||||||| || |||||| || | || |
Sbjct 47859 ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTA 47918
Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338
||||| ||||||| |||||||| || || | || ||| | | || || ||| |
Sbjct 47919 CCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCG 47978
Query 97339 CAGTTTGC 97346
| ||||||
Sbjct 47979 CTGTTTGC 47986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741052938049760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |