Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq643 378 2e-99
seq37 98.7 3e-15
>seq643
Length=117438
Score = 378 bits (418), Expect = 2e-99
Identities = 1147/1741 (66%), Gaps = 46/1741 (3%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | |||
Sbjct 47141 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 47200
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| | | || ||||| || || | | | || || | ||||| || || |
Sbjct 47201 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 47258
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|| || | | ||| || || |||| | || ||| | || || ||||| ||| |
Sbjct 47259 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 47318
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || ||| || ||||||| || || || |||| |||||| | ||||
Sbjct 47319 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 47378
Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
|||||| || || || ||||| | | || |||| | ||||| || | | |||
Sbjct 47379 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 47436
Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || || |||| | || || | ||||||||||| |||||||| |||
Sbjct 47437 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 47495
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
| ||||| | ||||| ||||||||||| ||||| || || || || || || |
Sbjct 47496 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 47555
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915
| ||||| || ||||| | || ||||| ||||| ||||| || || ||||| ||
Sbjct 47556 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 47614
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
||||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||
Sbjct 47615 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 47674
Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
|| || ||| | | |||| || | ||| | ||||| ||||||| || || ||| |
Sbjct 47675 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 47733
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
|| | |||||||| | || ||||| ||||||||||| || ||||| ||||
Sbjct 47734 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 47793
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
||| ||| | || || |||||||| |||| ||||| | || | |||| |||||
Sbjct 47794 TCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 47853
Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
|||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || |||
Sbjct 47854 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 47912
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
||||||| | || | || |||||| || || ||||| ||||||||| ||| || ||
Sbjct 47913 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 47971
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326
||| || || || |||||||| || | | || || | || | | |||||
Sbjct 47972 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGAT 48031
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384
| | | ||| | || | || | || || || | || | | | ||||| |
Sbjct 48032 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCC--GCAATTTGA 48089
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439
||||| | |||||| || | || || | | || || || ||| || ||
Sbjct 48090 ACAAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACAT 48144
Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499
|||||| || || |||||||||||||| || || || ||||| | || | |||
Sbjct 48145 GCGTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCG 48204
Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
||| | ||||| || ||||| ||||||| || || ||| | ||||| || || || ||
Sbjct 48205 CATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTA 48264
Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618
|| || | ||| | || |||| | | || || | || ||||| || |
Sbjct 48265 CCACGCTGCCCTTACTACGTC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCT 48323
Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678
|||| |||||| || |||| | ||||||| || | |||||||||| ||| |
Sbjct 48324 TCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCT 48383
Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737
||| || ||| ||||||| | || || | || |||| || |||| ||||||
Sbjct 48384 CTGACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 48443
Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795
|| |||||| || || ||||| || || |||| | ||||| || || |||||||
Sbjct 48444 GTCTGCTCGTT---GCTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACG 48500
Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855
| ||||| || || | || ||| | || |||||| || ||| | || || || |
Sbjct 48501 AATGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 48560
Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915
||| || || | || ||||||||||| |||| || || ||| || |
Sbjct 48561 AGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTA 48620
Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975
|||||||| ||||| || | ||| |||||| | |||||||| || | || | |
Sbjct 48621 TGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 48680
Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035
| | ||| || | ||||| || || ||||| ||||| |||| | | | ||||
Sbjct 48681 AGATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 48740
Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095
| || || || ||||| || || |||| ||||| | ||| | ||||| | |
Sbjct 48741 CTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 48800
Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155
| ||| | |||| | || |||||| ||| || ||||| |||||| ||||| |
Sbjct 48801 CTACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTG 48860
Query 365156 G 365156
|
Sbjct 48861 G 48861
>seq37
Length=309367
Score = 98.7 bits (108), Expect = 3e-15
Identities = 310/468 (66%), Gaps = 23/468 (5%)
Strand=Plus/Minus
Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249
|||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || ||
Sbjct 136032 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 135973
Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308
||||||||| || || ||| || | || | || ||| ||||| |||| |||
Sbjct 135972 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 135914
Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368
|||||| | || || ||||| || || | ||| | |||||||| || || |
Sbjct 135913 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 135862
Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419
||| ||| || | || ||| || | || || | || | ||| ||| || |
Sbjct 135861 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 135803
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477
|| |||| | || || ||||| |||||||| | |||||| | || ||||
Sbjct 135802 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 135743
Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| | || || | |||||| |||| ||||||| ||||| || || ||||| ||
Sbjct 135742 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 135683
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
|| ||| | | ||||| ||||| || || |||| | ||||| ||||| | |||||
Sbjct 135682 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 135623
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|| ||| | ||| || |||||||||||||| ||||| ||||| |||
Sbjct 135622 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 135575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303342311328632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |