Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq643 378 2e-99 seq37 98.7 3e-15 >seq643 Length=117438 Score = 378 bits (418), Expect = 2e-99 Identities = 1147/1741 (66%), Gaps = 46/1741 (3%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | ||| Sbjct 47141 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 47200 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| | | || ||||| || || | | | || || | ||||| || || | Sbjct 47201 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 47258 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 || || | | ||| || || |||| | || ||| | || || ||||| ||| | Sbjct 47259 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 47318 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || |||| |||||| | |||| Sbjct 47319 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 47378 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737 |||||| || || || ||||| | | || |||| | ||||| || | | ||| Sbjct 47379 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 47436 Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || || |||| | || || | ||||||||||| |||||||| ||| Sbjct 47437 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 47495 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| | ||||| ||||||||||| ||||| || || || || || || | Sbjct 47496 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 47555 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915 | ||||| || ||||| | || ||||| ||||| ||||| || || ||||| || Sbjct 47556 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 47614 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 ||||| | || || ||||| ||||||| || |||||| | |||| | ||| |||||| Sbjct 47615 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 47674 Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 || || ||| | | |||| || | ||| | ||||| ||||||| || || ||| | Sbjct 47675 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 47733 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 || | |||||||| | || ||||| ||||||||||| || ||||| |||| Sbjct 47734 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 47793 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||| ||| | || || |||||||| |||| ||||| | || | |||| ||||| Sbjct 47794 TCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 47853 Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 |||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || ||| Sbjct 47854 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 47912 Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 ||||||| | || | || |||||| || || ||||| ||||||||| ||| || || Sbjct 47913 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 47971 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326 ||| || || || |||||||| || | | || || | || | | ||||| Sbjct 47972 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGAT 48031 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384 | | | ||| | || | || | || || || | || | | | ||||| | Sbjct 48032 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCC--GCAATTTGA 48089 Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439 ||||| | |||||| || | || || | | || || || ||| || || Sbjct 48090 ACAAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACAT 48144 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 |||||| || || |||||||||||||| || || || ||||| | || | ||| Sbjct 48145 GCGTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCG 48204 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 ||| | ||||| || ||||| ||||||| || || ||| | ||||| || || || || Sbjct 48205 CATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTA 48264 Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618 || || | ||| | || |||| | | || || | || ||||| || | Sbjct 48265 CCACGCTGCCCTTACTACGTC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCT 48323 Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678 |||| |||||| || |||| | ||||||| || | |||||||||| ||| | Sbjct 48324 TCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCT 48383 Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737 ||| || ||| ||||||| | || || | || |||| || |||| |||||| Sbjct 48384 CTGACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 48443 Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 || |||||| || || ||||| || || |||| | ||||| || || ||||||| Sbjct 48444 GTCTGCTCGTT---GCTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACG 48500 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 | ||||| || || | || ||| | || |||||| || ||| | || || || | Sbjct 48501 AATGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 48560 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 ||| || || | || ||||||||||| |||| || || ||| || | Sbjct 48561 AGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTA 48620 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975 |||||||| ||||| || | ||| |||||| | |||||||| || | || | | Sbjct 48621 TGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 48680 Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035 | | ||| || | ||||| || || ||||| ||||| |||| | | | |||| Sbjct 48681 AGATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 48740 Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095 | || || || ||||| || || |||| ||||| | ||| | ||||| | | Sbjct 48741 CTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 48800 Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155 | ||| | |||| | || |||||| ||| || ||||| |||||| ||||| | Sbjct 48801 CTACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTG 48860 Query 365156 G 365156 | Sbjct 48861 G 48861 >seq37 Length=309367 Score = 98.7 bits (108), Expect = 3e-15 Identities = 310/468 (66%), Gaps = 23/468 (5%) Strand=Plus/Minus Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249 |||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || || Sbjct 136032 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 135973 Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308 ||||||||| || || ||| || | || | || ||| ||||| |||| ||| Sbjct 135972 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 135914 Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368 |||||| | || || ||||| || || | ||| | |||||||| || || | Sbjct 135913 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 135862 Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419 ||| ||| || | || ||| || | || || | || | ||| ||| || | Sbjct 135861 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 135803 Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477 || |||| | || || ||||| |||||||| | |||||| | || |||| Sbjct 135802 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 135743 Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536 | | || || | |||||| |||| ||||||| ||||| || || ||||| || Sbjct 135742 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 135683 Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596 || ||| | | ||||| ||||| || || |||| | ||||| ||||| | ||||| Sbjct 135682 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 135623 Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||| | ||| || |||||||||||||| ||||| ||||| ||| Sbjct 135622 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 135575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303342311328632