Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq635 107 4e-18
seq380 95.1 2e-14
>seq635
Length=135526
Score = 107 bits (118), Expect = 4e-18
Identities = 140/192 (73%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754
||| || |||||||| || |||||||||||||||||||| | | || || || || |
Sbjct 128925 AGTTGGATCTCTGTCTGGAGGTTGGAAGATGAAGCTGGCTTTGGCCCGTGCTATGCTGCA 128984
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGC 279814
||| || |||||||| || ||||||||||| || ||||| | ||| ||||| | ||
Sbjct 128985 GCGCGCTGATGTCCTTCTTCTTGATGAGCCTACTAACCATCTTGACGTTGCCAACATTGC 129044
Query 279815 CTGGCTAGTGTCCTACCTAACCAGTCTGA--AGAATGTTTCTTCCCTCATTGTCTCTCAC 279872
||||| | | |||||| | ||||| | | || | || ||||| ||||||
Sbjct 129045 ATGGCTCGAGAACTACCT--CAAGTCTCACCCCGACATTACCAGTCTTATTGTTTCTCAC 129102
Query 279873 GACTCTGGCTTC 279884
||||||||||||
Sbjct 129103 GACTCTGGCTTC 129114
>seq380
Length=135295
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| |||||||| || |||
Sbjct 1973 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTTGCCTACGGTGCCAAGATTCTTCTCAAC 2032
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| |||||||||| | || || ||||| |||||||| || |
Sbjct 2033 CAGACTCACCTCCGTCTCAAGCGTGGTCAGCGTTACGGTCTTTGTGGTCCCAACGGTTCC 2092
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 2093 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 2151
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569
||||| | ||| || | || ||||||||| | |||||| ||
Sbjct 2152 GGACGAGGTCAAGACTGTCTTCGTCGAGCACGACTTGGACTCCGCT 2197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027827897648516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |