Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq37 109 1e-18 seq380 91.5 3e-13 >seq37 Length=309367 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | |||||| ||||||||||||||||| || || || | || | Sbjct 135457 GGCATGAACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTT 135398 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | ||||| |||||||| |||| ||||| || | ||| |||||| ||| Sbjct 135397 GCTCTCGGCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATC 135338 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || ||| || ||||| ||||||||||| ||||| || Sbjct 135337 TCCCTTGGCGGCAAAACCAACTTCTTCGAGAAGCGCGT 135300 >seq380 Length=135295 Score = 91.5 bits (100), Expect = 3e-13 Identities = 170/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164 |||||||| | | ||| | || ||| | ||| | ||||| || ||| | |||| | Sbjct 2222 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCCAAGTCGTGCTCGACGAAGACAGTCT 2163 Query 334165 TCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAG 334224 | | | ||| |||||| || || | ||| |||| || |||||||| || | Sbjct 2162 TGACCTCGTCCTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGG 2103 Query 334225 TTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGA 334284 | || || || | ||||| || ||||| |||||||| || | |||||||| ||| || Sbjct 2102 TGGACTTTCCGGAACCGTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGA 2043 Query 334285 ACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACA 334344 | || | ||| |||||||| || |||| || || ||||| || ||| | || | Sbjct 2042 GGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAA 1983 Query 334345 GATCCTCACC 334354 |||||||||| Sbjct 1982 GATCCTCACC 1973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870447680600