Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq643 140 4e-28
>seq643
Length=117438
Score = 140 bits (154), Expect = 4e-28
Identities = 1075/1711 (63%), Gaps = 73/1711 (4%)
Strand=Plus/Minus
Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 48885 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 48826
Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 48825 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 48766
Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764
|| |||||| ||||| || || ||||| | |||| ||| || || |||
Sbjct 48765 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 48709
Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824
|||||||| |||| || ||| || || | ||||| | ||| || ||||| ||
Sbjct 48708 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 48649
Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 48648 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 48592
Query 113882 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938
||||||| |||| || |||||||| ||||| || || ||| || |
Sbjct 48591 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 48535
Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998
| ||||| |||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 48534 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTA 48475
Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058
||| || ||||| || || | ||| || ||||| |||| ||| | | | |
Sbjct 48474 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 48415
Query 114059 TCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116
|| ||||| |||||||| | | | || | || | | |||||| || ||||
Sbjct 48414 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 48357
Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176
|||| ||||| | ||||| || || |||| || || ||| || || || ||| |
Sbjct 48356 GGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAG 48297
Query 114177 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235
| | || | || || ||||| ||||| || || ||||| || || | |||
Sbjct 48296 CGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 48238
Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295
| | ||||| || ||||| | | ||| || || |||| || |||
Sbjct 48237 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGA 48178
Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 114355
||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 48177 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 48118
Query 114356 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTT-GTGATT 114412
|| || || ||||| | | | || | ||| | |||||| ||| ||||
Sbjct 48117 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATT---GCGGACAACGACTTGAGTGACC 48061
Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGG 114469
|| || ||||| | | | || | || || ||||||| ||| | || ||
Sbjct 48060 TCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAGA 48004
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
| | || || || || || |||| | |||||| | ||| || || || ||
Sbjct 48003 GACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCA 47944
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTAC 114587
|| |||| || || || ||||| || | ||||||||| || ||| ||| | || |
Sbjct 47943 GTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTGC 47886
Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647
| ||||||||| |||||| | || | || ||||| || |||| || ||||| || |
Sbjct 47885 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 47826
Query 114648 TCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTAC 114700
||| | | || | | || | | | ||| || |||| |||| |||||||
Sbjct 47825 ACCAAAGCTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTAC 47773
Query 114701 TTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 114760
||| ||| || || ||||| || ||||| | || | || || || || || |
Sbjct 47772 TTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTT 47714
Query 114761 -GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819
||||| | ||||| ||||| || ||| |||||||||||||| || || |||||
Sbjct 47713 AGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGAT 47654
Query 114820 CCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 114879
||| |||||| |||| || || ||| ||| | || || | || ||||| || |
Sbjct 47653 CCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAG 47594
Query 114880 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 114939
|| | || || | || || |||||||| || || ||||| | |||| | ||
Sbjct 47593 ATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACC--- 47537
Query 114940 ACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCAT 114993
| | || |||| |||||| || || | || ||| || || || || |||||
Sbjct 47536 AGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCAT 47477
Query 114994 TGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTG 115051
|||| |||||| | || ||||| || || ||| || ||| | | |||| | |
Sbjct 47476 GGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGG 47419
Query 115052 ACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 115111
| ||| || || |||||||| || ||| ||| || || || || | ||
Sbjct 47418 ATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTG 47359
Query 115112 AGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGAC 115171
|| | ||||||| || || || ||| |||| | | | ||||||||| ||
Sbjct 47358 AGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAA 47299
Query 115172 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 115231
| || ||| ||| ||||| |||||||| | || || | || || ||| | | ||
Sbjct 47298 AGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACT 47241
Query 115232 TG--GGACATCTTATCGTAGGTCTCCAAGAC 115260
|| ||||| | ||| |||||||||||
Sbjct 47240 TGCTTGACATGAGGTTGTATGTCTCCAAGAC 47210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597348552362080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |