Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq22 91.5 1e-13
>seq22
Length=419152
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || ||||| || || |||||||| || | || ||| || ||||
Sbjct 74871 AAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTC 74930
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| |||||||||||||| |||| | |||||||| || ||||| || || || || ||
Sbjct 74931 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTC 74990
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | || || | || || || | || | ||
Sbjct 74991 CTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATAGT 75050
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
|||||||||||| || || ||||
Sbjct 75051 CTTGCCGGTCAAGGTCTTGACGA 75073
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| || | || |||||| | || || ||||||||||||
Sbjct 75169 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 75228
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| | |||||||| || ||||| || || || || || || || || |||
Sbjct 75229 GCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 75288
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || || | || | ||||||||| || | ||
Sbjct 75289 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 75348
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| ||||||||
Sbjct 75349 TTGACGAAGATTTGCAT 75365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499640578001440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |