Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq643 122 1e-22
>seq643
Length=117438
Score = 122 bits (134), Expect = 1e-22
Identities = 1072/1709 (63%), Gaps = 67/1709 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 48885 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 48826
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 48825 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 48766
Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 48765 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 48709
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|||||||| |||| || ||| || || | ||||| | ||| || ||||||||
Sbjct 48708 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 48649
Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 48648 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 48592
Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898
||||||| | | ||| | |||||||| ||||| || || ||| || |
Sbjct 48591 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 48536
Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958
| |||||||||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 48535 TTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGT 48476
Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018
||| || ||||| || || | ||| || |||||||||| ||| | | |
Sbjct 48475 ACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 48416
Query 116019 TTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| ||||| ||||||| | || | || | || | | |||||| || |||
Sbjct 48415 CTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAG--AGGGCTTGACATTCCACATGTCGAAC 48358
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
||||| ||||| | || || || || |||| || || || || || || |||
Sbjct 48357 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTA 48298
Query 116137 GCCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195
|| | || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 48297 GCGAGTTGCACAG-ACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 48239
Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAG 116255
|| | ||||| || ||||| | | ||| || || |||| || ||
Sbjct 48238 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAG 48179
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
|||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 48178 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGAC 48119
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTT-TGTGAT 116372
|| || || ||||| | | | || | | ||| |||||| ||| ||||
Sbjct 48118 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAA---TTGCGGACAACGACTTGAGTGAC 48062
Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAG 116429
|| || ||||| | | | || | || || |||||| |||| | || ||
Sbjct 48061 CTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAG 48005
Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489
| | || || || || || |||| | |||||| | ||| || || || ||
Sbjct 48004 AGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTC 47945
Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTA 116547
|| |||| || || || ||||| || | ||||||||| || ||| ||| | ||
Sbjct 47944 AGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTG 47887
Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607
|| ||||||||||||||| | || | || ||||| || |||| || ||||| ||
Sbjct 47886 CAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCG 47827
Query 116608 TTCCATA-CATCGGCGGC-TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 116665
| ||| | | || | | | || | | | ||| | ||||| ||||||||||
Sbjct 47826 TACCAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCTCGTACTTTT 47769
Query 116666 TGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTT-ATCTGG 116723
||| || |||||||| || ||| || ||| || | || || || || || | ||
Sbjct 47768 CGTACAGAGCCTCAAATTCGTCA-CCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 47711
Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783
|| | ||||| ||||| || ||| || ||||||||||| || || ||||||||
Sbjct 47710 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 47651
Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843
|| || |||| || || ||| ||| | || || | || ||||| || | ||
Sbjct 47650 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 47591
Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CC 116897
| || || | || || |||||||| || || ||||| | |||| | || |
Sbjct 47590 AAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCG 47531
Query 116898 CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957
|||| |||| |||||| || || | || || ||| || || || ||||| ||
Sbjct 47530 CTTG---TTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 47474
Query 116958 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACA 117015
|| |||||| | || ||||| || || ||| || ||| | |||| | ||
Sbjct 47473 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 47416
Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075
|||| || || |||||||| || ||| ||| || || || || | ||||
Sbjct 47415 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 47356
Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135
| ||||||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 47355 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 47296
Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 117194
|| ||| ||| ||||| |||||||| | || || | || || ||| | | ||||
Sbjct 47295 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 47238
Query 117195 -GGACATCTTATCGTAGGTCTCCAAGACA 117222
||||| | ||| ||||||||||||
Sbjct 47237 TTGACATGAGGTTGTATGTCTCCAAGACA 47209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502015864160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |