Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq312 104 2e-16
seq393 96.9 3e-14
>seq312
Length=59172
Score = 104 bits (114), Expect = 2e-16
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
||||| ||||||||| | |||| || |||||||| || ||||||||| | |||||||||
Sbjct 34979 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 35038
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || |||||| |||| |||| || | ||| |||| || ||||| |||| || ||
Sbjct 35039 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTCGTAGCATC 35098
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|| || ||||||| | ||| | ||| ||
Sbjct 35099 GCCCGAACCCTTACTTATCCCGAGACTGTCAC 35130
>seq393
Length=99189
Score = 96.9 bits (106), Expect = 3e-14
Identities = 217/326 (67%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 518038
|||| ||||| ||||| || | ||| | | || ||||| || || |||||||||
Sbjct 6689 TTATGTTTTCGTTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTCA 6748
Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098
|| ||||| | ||||| || | |||| | || | ||| | || || |||| |
Sbjct 6749 CCACCCAAGTGAGTATCACCGGCAGTAGACTTGACCTCGAAGATACCTTCCTCAATGGTA 6808
Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158
| |||| |||||| || |||||||| | ||| || || || || || ||
Sbjct 6809 AGGAGAGATACATCGAAAGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCC 6868
Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218
|| || || |||||||| || |||| || ||||| || || || || || ||||
Sbjct 6869 TCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCGG 6928
Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278
| ||| || ||||| || || || ||||| || || || || | || || |||||
Sbjct 6929 AGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTTG 6988
Query 518279 AAATATGCAGGAACAGTAATAACGGC 518304
|| || ||||| || || | ||||||
Sbjct 6989 AAGTAGGCAGGGACGGTGACAACGGC 7014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780788854653256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |