Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq643 187 3e-42 seq37 129 7e-25 seq546 95.1 2e-14 >seq643 Length=117438 Score = 187 bits (206), Expect = 3e-42 Identities = 569/868 (66%), Gaps = 21/868 (2%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| | ||| ||||||| ||||| | || ||| || || |||||||| ||| Sbjct 47152 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 47211 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || ||||| | | |||| || |||| || || | || Sbjct 47212 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATT 47271 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| ||||| ||| || || | || || |||||| ||| | |||||||| Sbjct 47272 CAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGA 47331 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || |||| || |||| || |||| |||||| || || ||| |||||| Sbjct 47332 CAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGG 47391 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || || || ||| || | |||| ||| || ||||| || Sbjct 47392 TGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACCAA 47451 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 |||| || | ||||| |||| ||||| || || || ||| ||| || || || || Sbjct 47452 TGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGT 47511 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| | |||| || || |||| |||| |||||||||||||| Sbjct 47512 TGACCAGGGTGG---TAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCA 47568 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGG 112082 ||| || || | ||||||||||| | || || || ||| | ||||||| |||| Sbjct 47569 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGC 47628 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 | || || || |||| ||||| ||||| || ||||| ||||||||| | || ||| Sbjct 47629 T--CGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 47686 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | ||| ||||| | || || || || || || || || | || | || Sbjct 47687 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 47745 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| || ||||| || || ||| |||||||||| ||| || || | | || | | Sbjct 47746 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCT 47803 Query 112262 GCCA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 || ||| | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 47804 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCC 47862 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||| ||||| || ||| || | |||||||| |||||||| | ||| || Sbjct 47863 TTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCAT 47922 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438 | || |||||||| || || || ||| | |||| | | |||||| ||||| Sbjct 47923 CCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGT 47982 Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCC 112466 || ||||| || || | |||| ||| Sbjct 47983 TTGCAACCTTGCCTCCTTGTCTCTGCCC 48010 >seq37 Length=309367 Score = 129 bits (142), Expect = 7e-25 Identities = 351/525 (67%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTA---AAT 101873 ||||| ||||| ||| | |||||||| |||||| | |||| ||||| | | | | | Sbjct 136096 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTCCACGACTGGAACAACCGATTGACT 136037 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 | | || | | ||||| |||| || || ||||| |||| ||||| || || Sbjct 136036 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATC 135977 Query 101934 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||||| | | | | | | || | ||||| || |||| | || || ||| Sbjct 135976 GTCAATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCC-GAGGCTCGAT 135919 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||||| || || | |||| ||| | | | || || |||||| ||| Sbjct 135918 GCTTCTATG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCCCTCCTC 135860 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || || | || || ||||| ||| || | | ||||| | ||| | | || Sbjct 135859 ATCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGACACT 135800 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 102167 |||| || || | |||||| ||||||||||| || ||| | |||| || || Sbjct 135799 ATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAACTC- 135741 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | |||||||| |||| || | || ||||| |||||||||||||||||| ||| Sbjct 135740 --TACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 135683 Query 102228 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 |||| ||| | || | |||||||||||||| || |||||||| ||||| |||| || Sbjct 135682 GCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTC 135624 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||| || |||||||| ||||| || ||| || ||||| Sbjct 135623 TAACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGC 135579 >seq546 Length=71430 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/275 (69%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||||||||||||||| || |||| |||||| || || | || | | | || || Sbjct 61534 GGCATCAATCTCATCGATAAAGATGATGCAAGGGGCGTTCTTACGGCCCTCGGCGAACAG 61593 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 ||| ||||||||| | || ||||||||||||||||| || || | | || || Sbjct 61594 ATCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 61653 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | |||||| || ||| |||||||| |||| ||| || | |||||||| | Sbjct 61654 GCTGAA-GAAGGGTACTCCAGACTCACCCGCCGTGGCCTTGGCAAGCAACGTCTTACCAG 61712 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGT 16299 |||| || || || | | ||||||||||| |||||||| || || |||| | Sbjct 61713 TACCGGGGGGTCCAGCCAAAATAGCACCTCGTGGGATCTTGGCACCCAGCTTTTCAAACT 61772 Query 16300 ATCTCTCAGGTTGCTT-AAGAAAATCCACAATCTC 16333 ||||||| ||||| ||||| | ||||| ||| Sbjct 61773 ---TCTCAGGCTGCTTCAAGAAGCT-CACAAACTC 61803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737154726720