Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq37 167 4e-36 seq643 156 8e-33 >seq37 Length=309367 Score = 167 bits (184), Expect = 4e-36 Identities = 384/570 (67%), Gaps = 9/570 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| || || ||||| ||||| Sbjct 136132 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 136073 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAA---AGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || | || | ||||||||| | || || Sbjct 136072 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 136013 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| || || || || || |||||||| ||| || Sbjct 136012 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 135953 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||| ||||||||||| || Sbjct 135952 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATG 135893 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772 || || | ||||| || || || || | ||| || ||||| | ||| || Sbjct 135892 GAGAACATCCACTCCGAAACATACTCCCTCCTCATCGAT-ACCTACATCAAGGACCCTGC 135834 Query 25773 CGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCG 25830 | || | | || || || ||| | || ||| || || ||||| | ||||||| Sbjct 135833 CCAGCGTACATAC-CTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCG 135776 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||||| |||||| | ||| | |||| |||| |||| || || || Sbjct 135775 GATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGCT 135716 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 |||||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||| Sbjct 135715 TTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 135656 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || ||| |||||| ||||||||||| | || |||||| Sbjct 135655 AAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGT 135596 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || |||| || |||||||| || ||| || Sbjct 135595 CTTCACACCGACTTTGCCTGTCTCCTCCAC 135566 >seq643 Length=117438 Score = 156 bits (172), Expect = 8e-33 Identities = 708/1103 (64%), Gaps = 51/1103 (5%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| ||||| |||||| || ||| | ||||| || Sbjct 48279 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCAGG 48221 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || || | ||| Sbjct 48220 AGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACC 48161 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | || || ||| | || || || ||||||| Sbjct 48160 AATGGGTCGGTGACGCATGTTGCTGTTACGA--GCCTCTTGGACAGGGTAGTGGTTGACG 48103 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | || | | ||||| | |||||| |||||||| | Sbjct 48102 TCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAG 48043 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| | | | | || || | |||| | || | | | | Sbjct 48042 TCGTAG--CAAG-CATCTTCATAGTTGATG---------AAAGAGGGCAGAGACAAGGAG 47995 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| || | | || | |||||||| || || ||| Sbjct 47994 GCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGG 47935 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832 ||| || |||||| || |||| || || ||| |||||||||| ||| | ||||| Sbjct 47934 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTG-CAGTGATCCTT 47876 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| || || || ||||| ||| ||| | ||||| || ||| || | Sbjct 47875 GTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCT- 47817 Query 221893 TCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 |||| || | | | | | ||| | | | |||| |||||| ||| Sbjct 47816 TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTAC------- 47764 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | |||| | |||||||| || | ||||| || || | || |||| Sbjct 47763 AGAGCCT--CAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACA 47706 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | ||| |||| | ||| ||| | ||| | || |||||| || || |||||||| || Sbjct 47705 TGAGAGTCCATTCGCCGTT-TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGA 47647 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || || || || | | || ||||||| |||| || || | ||||| | Sbjct 47646 GCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGG 47587 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | ||| |||||||| ||||| || |||| ||| | || || ||||||||| Sbjct 47586 AACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTG 47527 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 || |||||||| | || | | ||| | |||||| | || || | || || | Sbjct 47526 TTACCACCCTGGT-CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 47468 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACT 222300 |||||||| ||| ||||| || ||||| | || ||| | | ||| Sbjct 47467 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---G 47411 Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 ||| || ||| |||||||| || || || |||||||| || ||||||| || || Sbjct 47410 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 47351 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| || || || ||||||||| | | | || || || || || | ||||| Sbjct 47350 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 47291 Query 222421 TTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | ||||| || |||||| || | ||||| || || || || ||| | || ||| Sbjct 47290 CT--GTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGAC 47233 Query 222479 ATCAGATCGTACGTCTCTACGAC 222501 || || | ||| ||||| | ||| Sbjct 47232 ATGAGGTTGTATGTCTCCAAGAC 47210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836951261440