Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq37 167 4e-36
seq643 156 8e-33
>seq37
Length=309367
Score = 167 bits (184), Expect = 4e-36
Identities = 384/570 (67%), Gaps = 9/570 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| || || ||||| |||||
Sbjct 136132 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 136073
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAA---AGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || | || | ||||||||| | || ||
Sbjct 136072 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 136013
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || ||||| || || || || || |||||||| ||| ||
Sbjct 136012 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 135953
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||| ||||||||||| ||
Sbjct 135952 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATG 135893
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772
|| || | ||||| || || || || | ||| || ||||| | ||| ||
Sbjct 135892 GAGAACATCCACTCCGAAACATACTCCCTCCTCATCGAT-ACCTACATCAAGGACCCTGC 135834
Query 25773 CGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCG 25830
| || | | || || || ||| | || ||| || || ||||| | |||||||
Sbjct 135833 CCAGCGTACATAC-CTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCG 135776
Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890
|||||||| |||||| | ||| | |||| |||| |||| || || ||
Sbjct 135775 GATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGCT 135716
Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950
|||||||| || ||||| ||||| ||||||||| | ||||| |||||||||||||||||
Sbjct 135715 TTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 135656
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| || |||||| || ||| |||||| ||||||||||| | || ||||||
Sbjct 135655 AAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGT 135596
Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040
|| |||| || |||||||| || ||| ||
Sbjct 135595 CTTCACACCGACTTTGCCTGTCTCCTCCAC 135566
>seq643
Length=117438
Score = 156 bits (172), Expect = 8e-33
Identities = 708/1103 (64%), Gaps = 51/1103 (5%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||||||||||||||||||||| ||||| |||||| || ||| | ||||| ||
Sbjct 48279 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCAGG 48221
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| |||||||| || || | ||| | || || || || || || || | |||
Sbjct 48220 AGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACC 48161
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
||||| | ||| | | ||||| | || || ||| | || || || |||||||
Sbjct 48160 AATGGGTCGGTGACGCATGTTGCTGTTACGA--GCCTCTTGGACAGGGTAGTGGTTGACG 48103
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| | || | | ||||| | |||||| |||||||| |
Sbjct 48102 TCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAG 48043
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
| | | ||| | | | | || || | |||| | || | | | |
Sbjct 48042 TCGTAG--CAAG-CATCTTCATAGTTGATG---------AAAGAGGGCAGAGACAAGGAG 47995
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|| ||||| || || || ||||| || | | || | |||||||| || || |||
Sbjct 47994 GCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGG 47935
Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832
||| || |||||| || |||| || || ||| |||||||||| ||| | |||||
Sbjct 47934 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTG-CAGTGATCCTT 47876
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||||||||| || || || ||||| ||| ||| | ||||| || ||| || |
Sbjct 47875 GTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCT- 47817
Query 221893 TCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945
|||| || | | | | | ||| | | | |||| |||||| |||
Sbjct 47816 TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTAC------- 47764
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005
||||| | |||| | |||||||| || | ||||| || || | || ||||
Sbjct 47763 AGAGCCT--CAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACA 47706
Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
| ||| |||| | ||| ||| | ||| | || |||||| || || |||||||| ||
Sbjct 47705 TGAGAGTCCATTCGCCGTT-TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGA 47647
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| || || || | | || ||||||| |||| || || | ||||| |
Sbjct 47646 GCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGG 47587
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
||||| || | ||| |||||||| ||||| || |||| ||| | || || |||||||||
Sbjct 47586 AACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTG 47527
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243
|| |||||||| | || | | ||| | |||||| | || || | || || |
Sbjct 47526 TTACCACCCTGGT-CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 47468
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACT 222300
|||||||| ||| ||||| || ||||| | || ||| | | |||
Sbjct 47467 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---G 47411
Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
||| || ||| |||||||| || || || |||||||| || ||||||| || ||
Sbjct 47410 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 47351
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||| || || || ||||||||| | | | || || || || || | |||||
Sbjct 47350 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 47291
Query 222421 TTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478
| ||||| || |||||| || | ||||| || || || || ||| | || |||
Sbjct 47290 CT--GTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGAC 47233
Query 222479 ATCAGATCGTACGTCTCTACGAC 222501
|| || | ||| ||||| | |||
Sbjct 47232 ATGAGGTTGTATGTCTCCAAGAC 47210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928836951261440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |