Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq643 196 6e-45
seq37 98.7 1e-15
>seq643
Length=117438
Score = 196 bits (216), Expect = 6e-45
Identities = 1039/1637 (63%), Gaps = 43/1637 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| |||
Sbjct 47152 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 47211
Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328
||||||||||||| || ||||| |||| | | ||| ||| |||| || || |
Sbjct 47212 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCAAGCCCCACTTTA 47269
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||| || ||||| ||| || ||| | || ||||||||| | | | ||||||
Sbjct 47270 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAG 47329
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| || | |||||||| | || || | | ||||| || || ||| ||||
Sbjct 47330 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 47389
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| || || ||| | | |||| | ||| || || ||
Sbjct 47390 GGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 47449
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | ||||| |||| ||||| || || || ||| ||| || || ||
Sbjct 47450 AATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 47509
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622
|| | || ||| || |||| | || || |||| ||||| | || ||||||
Sbjct 47510 GTTGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGG 47566
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | ||||||||||| | ||| || || ||| | || |||| ||
Sbjct 47567 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGC 47626
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | || || || | | | || ||||| || || |||||||||||||| || |||
Sbjct 47627 GCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 47686
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| ||||| |||| | || || || || || || || || | ||| ||
Sbjct 47687 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 47745
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGT-AGAGCCAATGCGACT 75859
||| || ||||| || || ||| |||||| || ||| |||||| || | | || | |
Sbjct 47746 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGA-GAGGGTAAGGGTC---GCAAGT 47801
Query 75860 GTA-CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917
|| | || | | || | ||||| | || ||||| | | ||||| ||||| |||| |
Sbjct 47802 CTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACC 47861
Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977
| | ||||| ||||||||| || || ||||||||||||||||| | || || |
Sbjct 47862 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCA 47921
Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037
|| ||||| || || ||||| || || | || ||| | |||||| ||||
Sbjct 47922 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 47981
Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094
||||||| | || || | | || || | ||| ||||||| || || |
Sbjct 47982 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGC---T 48038
Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
|| | | || || || || |||| | | ||| | ||| | ||| |||
Sbjct 48039 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCCGCAATTTGAACAAGATCA 48098
Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214
| ||| || || || || | || || || || ||||| ||| |||| |
Sbjct 48099 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 48158
Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274
||||| | ||||| |||||||| || |||| || || |||| | ||||| |
Sbjct 48159 TTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGT 48218
Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334
| ||| || ||| |||| | ||||| || ||||| || ||||| ||||
Sbjct 48219 CTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTA 48278
Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| |||| || | ||| | | ||||| |||| || || |||| || ||
Sbjct 48279 CTACG-TCTGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCT 48337
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451
|| || | || | || ||||| || |||| |||| || || || || | | | |
Sbjct 48338 GCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTCAAGCC-CTCTGACCTTTGGG 48395
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
||||||| ||| || ||||| | ||| | || |||||||| | | |
Sbjct 48396 ACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 48455
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || ||||| || ||| || | || || | || || || ||||||||||| || |
Sbjct 48456 CTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTT 48515
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | |||||||||| | || ||| || || ||||| ||||||||
Sbjct 48516 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 48575
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688
|| |||| || || | || ||||| |||||| | | ||||||| | | ||
Sbjct 48576 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 48635
Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
|| ||| | | ||||| || || || ||| | | ||||| | || |||||| |
Sbjct 48636 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 48691
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| || |||||||| || | | | || | | ||||| || || |||
Sbjct 48692 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 48751
Query 76808 GGTCGCTTCATTGATCA 76824
||| ||||||||||||
Sbjct 48752 GGTGCCTTCATTGATCA 48768
>seq37
Length=309367
Score = 98.7 bits (108), Expect = 1e-15
Identities = 303/460 (66%), Gaps = 24/460 (5%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| || |||| ||| |||| ||||| || ||||||||||||||| ||| | |
Sbjct 135738 CCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCT 135679
Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187
| ||| | || | ||| | |||||||| || |||||||| || || |||| || ||
Sbjct 135678 T-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAAC 135620
Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247
|| || ||||| || ||||||||||| ||| || |||||| || ||| || | ||
Sbjct 135619 GAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCC-TG--TCTCCTCCACTCT 135563
Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
| || ||| ||| | | | ||||| | ||| | | || || |||
Sbjct 135562 CACCTCAAGGGACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCT 135503
Query 65305 ATTGAGAAAGGGTTCATCTT--GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362
|||||| | | ||| |||| || || ||||| ||| || |||| ||||||||
Sbjct 135502 ATTGAGCAGGAGTT--TCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCA 135445
Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-G 65421
| ||| ||||||| || | || | |||||||||||| |||| | |
Sbjct 135444 ACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTC------GTTGCTCTCG 135391
Query 65422 CCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTG 65476
|| | | | | || | | || || || ||||| ||||| ||||| |||||
Sbjct 135390 GCAACGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTG 135331
Query 65477 ATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|| || ||||||||||| |||||||| |||| |||||
Sbjct 135330 GCGGCAAAACCAACTTCTTCGAGAAGCGCGTTGCTGACTA 135291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564558986880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |