Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq22 95.1 2e-14 >seq22 Length=419152 Score = 95.1 bits (104), Expect = 2e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || || || || || | || | ||| || || || Sbjct 75129 AATTTGCATACCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTT 75188 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||||| | || | ||| || | || || ||||| ||||| |||| ||| || Sbjct 75189 GTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTG 75248 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || || || || || || |||| || | ||| || || ||||| Sbjct 75249 ATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGA 75308 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || ||||| || || || || || |||||||| Sbjct 75309 TGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 75365 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| ||||| || | || | || || || || |||||||| | |||| | Sbjct 74869 CGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCG 74928 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || ||||| ||||| |||| ||| ||||||||||| || || || || Sbjct 74929 TCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTG 74988 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | ||| ||||| ||||| ||||| || || || || ||| Sbjct 74989 TCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATA 75048 Query 193326 GTTTTACCTGT 193336 || || || || Sbjct 75049 GTCTTGCCGGT 75059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899646797920320