Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq643 143 2e-29 >seq643 Length=117438 Score = 143 bits (158), Expect = 2e-29 Identities = 417/632 (66%), Gaps = 19/632 (3%) Strand=Plus/Minus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 ||||||||||||||| || | || ||| ||||||||| ||||| ||| | | || Sbjct 47779 CTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 47720 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | || ||| |||||||| | |||| ||||||| || ||| ||| ||||||| ||||| Sbjct 47719 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 47660 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 || ||||| | ||| || | || || || || || ||| | || || | | Sbjct 47659 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTA-CCGTGATTC- 47602 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 |||| | | |||||| || || ||||| ||||||||||| || || |||||||| | Sbjct 47601 TTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAG 47542 Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||| ||||| || || |||| || ||| || ||||| || ||| Sbjct 47541 GCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGC 47482 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652 | ||| || | | |||| | | || || ||||| || | | | | | | || Sbjct 47481 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGT---- 47426 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| || | || | ||| || || || | | ||||| || | | || Sbjct 47425 GGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACA 47366 Query 139713 A-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771 | || | | || ||||| ||||| |||||||| |||| ||| || || |||| Sbjct 47365 AGTCTTG-AGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGC 47307 Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831 |||| ||||| || || || || ||||| || | ||| || || || || |||| Sbjct 47306 ATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA 47247 Query 139832 A-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890 | | ||| || ||||| | | ||| || || | | | | | ||||||| || | Sbjct 47246 AGAACTTGCTT-GACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG 47188 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTG 139922 || || |||| ||||||||| | |||||| || Sbjct 47187 ATTCCAACAGCGACTCGCATGATCATATGCTG 47156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893798365280