Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq393 98.7 7e-15
seq312 98.7 7e-15
>seq393
Length=99189
Score = 98.7 bits (108), Expect = 7e-15
Identities = 254/385 (66%), Gaps = 3/385 (1%)
Strand=Plus/Plus
Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483
|||||| || || | ||||| |||||||| | ||| || ||||| ||||| || || |
Sbjct 5848 CGGCAGAAACGTTCATGATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAA 5907
Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543
| || | ||||||| ||||| || | | || | |||| || || || |
Sbjct 5908 CACCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCT 5967
Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603
| ||| | || ||||||||| | | |||||| || ||| || || || ||
Sbjct 5968 TGGTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGA 6027
Query 281604 AAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 281663
| || | || || ||| || || ||||| || ||||| | |||| ||||
Sbjct 6028 AGGTAGAGAAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATAAGCTTGG 6087
Query 281664 TCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 281723
|||| ||||||||||| || || | ||| ||||| ||||| | ||| || | || | ||
Sbjct 6088 TCATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACGTCGAGGAGCAGAA 6147
Query 281724 TAT--TTTGAAGTTTTTC-ATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780
| | || | | || | | || | |||| || ||||| || || | ||| ||||
Sbjct 6148 TCTCGTTGGTGGCCTTGCTAGAGGTGTCACCAGAGAGGATAGCAGCCTGGACAGCGGCAC 6207
Query 281781 CATATGCAACAGCTTCATCAGGATT 281805
| || |||||||| |||||||| ||
Sbjct 6208 CGTAGGCAACAGCCTCATCAGGGTT 6232
Score = 93.3 bits (102), Expect = 3e-13
Identities = 216/326 (66%), Gaps = 0/326 (0%)
Strand=Plus/Plus
Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 282205
|||| ||||| ||||| || | ||| | | || ||||| || || |||||||||
Sbjct 6689 TTATGTTTTCGTTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTCA 6748
Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265
|| ||||| | ||||| || | |||| | || | ||| | || || |||| |
Sbjct 6749 CCACCCAAGTGAGTATCACCGGCAGTAGACTTGACCTCGAAGATACCTTCCTCAATGGTA 6808
Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 282325
| |||| ||||| || |||||||| | ||| || || || || || ||
Sbjct 6809 AGGAGAGATACATCGAAAGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCC 6868
Query 282326 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 282385
|| || || |||||||| || |||| || ||||| || || || || || ||||
Sbjct 6869 TCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCGG 6928
Query 282386 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 282445
| ||| || ||||| || || || ||||| || || || || | || || |||||
Sbjct 6929 AGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCGTTG 6988
Query 282446 AAATATGCAGGAACAGTAATAACGGC 282471
|| || ||||| || || | ||||||
Sbjct 6989 AAGTAGGCAGGGACGGTGACAACGGC 7014
>seq312
Length=59172
Score = 98.7 bits (108), Expect = 7e-15
Identities = 89/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||||||| | |||| || |||||||| |||||||||||| | |||||||||
Sbjct 34979 GGTAAGGAAGGTCGTCTCCGAGGTAACTTGATGGGTAAGCGTGTCGATTTCTCTGCACGT 35038
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTC 432399
|| || |||||| |||| | || || | ||| |||| || ||||| ||||
Sbjct 35039 ACCGTCATTACTGGTGATGCCAACCTTTCCCTCCATGAGGTCGGTGTGCCTC 35090
Score = 86.0 bits (94), Expect = 5e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
|| ||||||||||| | ||||||||||| |||||| | ||| |||| || | || |||
Sbjct 36422 GAGTTTTTCTTCCACGCCATGGCTGGTCGAGAAGGTCTCATTGATACTGCGGTCAAGACT 36481
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
||||| |||||||| ||||| || | | |||||| ||||||||
Sbjct 36482 GCTGAAACTGGTTACATTCAGCGACGATTGGTCAAGGCTCTTGAAGA 36528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740597211256776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |