Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq37 181 2e-39
>seq37
Length=309367
Score = 181 bits (200), Expect = 2e-39
Identities = 357/513 (70%), Gaps = 24/513 (5%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||| ||||||||||| ||||| || |||||| |||| |
Sbjct 136133 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATC 136075
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGCTGAGCGAC----GACGAGCGCCATTT 1455886
|| | || |||| ||||| | || ||| ||||||| | ||
Sbjct 136074 TCTCCAAGGATCTCCACG----ACTGGAACAACC-GATTGACTTCAGACGAGCAATACTT 136020
Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946
|||| ||| | || || ||| ||||| ||| ||| |||||||| ||||| || |
Sbjct 136019 CATCTCCCACATTCTTGC-TTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTG 135961
Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006
| || || | |||||||| | || ||||| || | || || || |||||||
Sbjct 135960 TTGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGA 135901
Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066
|| || || ||||||||||| ||||| ||||| ||||| ||||| |||||| ||||||
Sbjct 135900 TCATGATGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGG 135841
Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|||| | | || | || ||||||| |||| | ||||| | || | | | ||
Sbjct 135840 ACCCTGCCCAG-CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAG 135782
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185
||||| || ||||| || |||||| | | | | ||| || |||||| |||| |
Sbjct 135781 AAGGCGGATTGGGCCATCCGATGGATCCAGGA-TAAGAACTCTAC-CTTTGCTCAGCGTC 135724
Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTT 1456242
| || | ||||| | ||| ||||| ||||| ||| ||| || || || |||||||
Sbjct 135723 TTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCT--TCCATCTT 135666
Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||||||||||| ||||||||||| |||||
Sbjct 135665 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 135633
Score = 91.5 bits (100), Expect = 2e-12
Identities = 174/251 (69%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|| ||| ||| ||||| || ||| | |||||| | | ||| | || || ||
Sbjct 135523 ATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACTGAGGCTCTCCCTTGTGCC 135464
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| ||||||||||| ||| | |||||| |||||||| ||| || ||||| || || |
Sbjct 135463 CTGCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATCGAA-TTCGTCGCTGATCGTC 135406
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| |||| || |||||| | |||||| ||| | | ||||||| ||| | |||
Sbjct 135405 TCCTCGTTGCTCTCGGCAAC-GAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATG 135347
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761
||| ||||| || | ||||| |||||||| |||||| ||||| || || |||
Sbjct 135346 GAGAACATCTCCCTTGGCGGCAAAACCAACTTCTTCGAGAAGCGCGTTGCTGACTACCAG 135287
Query 1456762 AAGGCCGGCGT 1456772
|||||||| ||
Sbjct 135286 AAGGCCGGTGT 135276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177745998557512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |