Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq37 181 2e-39 >seq37 Length=309367 Score = 181 bits (200), Expect = 2e-39 Identities = 357/513 (70%), Gaps = 24/513 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||||||| ||||| || |||||| |||| | Sbjct 136133 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATC 136075 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGCTGAGCGAC----GACGAGCGCCATTT 1455886 || | || |||| ||||| | || ||| ||||||| | || Sbjct 136074 TCTCCAAGGATCTCCACG----ACTGGAACAACC-GATTGACTTCAGACGAGCAATACTT 136020 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| ||| | || || ||| ||||| ||| ||| |||||||| ||||| || | Sbjct 136019 CATCTCCCACATTCTTGC-TTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTG 135961 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | || || | |||||||| | || ||||| || | || || || ||||||| Sbjct 135960 TTGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGA 135901 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| ||||| ||||| ||||| ||||| |||||| |||||| Sbjct 135900 TCATGATGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGG 135841 Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 |||| | | || | || ||||||| |||| | ||||| | || | | | || Sbjct 135840 ACCCTGCCCAG-CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAG 135782 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 ||||| || ||||| || |||||| | | | | ||| || |||||| |||| | Sbjct 135781 AAGGCGGATTGGGCCATCCGATGGATCCAGGA-TAAGAACTCTAC-CTTTGCTCAGCGTC 135724 Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTT 1456242 | || | ||||| | ||| ||||| ||||| ||| ||| || || || ||||||| Sbjct 135723 TTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCT--TCCATCTT 135666 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| ||||||||||| ||||| Sbjct 135665 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 135633 Score = 91.5 bits (100), Expect = 2e-12 Identities = 174/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 || ||| ||| ||||| || ||| | |||||| | | ||| | || || || Sbjct 135523 ATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACTGAGGCTCTCCCTTGTGCC 135464 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||| ||| | |||||| |||||||| ||| || ||||| || || | Sbjct 135463 CTGCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATCGAA-TTCGTCGCTGATCGTC 135406 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| | |||||| ||| | | ||||||| ||| | ||| Sbjct 135405 TCCTCGTTGCTCTCGGCAAC-GAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATG 135347 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761 ||| ||||| || | ||||| |||||||| |||||| ||||| || || ||| Sbjct 135346 GAGAACATCTCCCTTGGCGGCAAAACCAACTTCTTCGAGAAGCGCGTTGCTGACTACCAG 135287 Query 1456762 AAGGCCGGCGT 1456772 |||||||| || Sbjct 135286 AAGGCCGGTGT 135276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177745998557512