Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31] 676 sequences; 36,468,289 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq37 105 2e-17 seq643 86.0 2e-11 >seq37 Length=309367 Score = 105 bits (116), Expect = 2e-17 Identities = 123/165 (75%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || |||||||||| || || || | || || ||||| |||| || ||| Sbjct 135729 AGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT-GCTTCC 135671 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || |||||||| || |||| ||||||| |||| |||||| || || Sbjct 135670 ATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATT 135611 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 ||| || |||||| | || |||||| |||||||| ||| || Sbjct 135610 TCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGTCTCCTCCAC 135566 >seq643 Length=117438 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||||||||||||| ||||| ||||| || || || || ||| || Sbjct 47474 CCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGA 47533 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 || || || ||| |||||||||| ||||| |||||||||||| Sbjct 47534 CCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCACGCCGAC 47575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588322243024820