Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq643 214 2e-50
seq37 100 4e-16
>seq643
Length=117438
Score = 214 bits (236), Expect = 2e-50
Identities = 1008/1583 (64%), Gaps = 41/1583 (3%)
Strand=Plus/Minus
Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583
||| ||||| || || || ||| |||||| || | ||||| | | ||| |||||
Sbjct 48715 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 48656
Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639
||| ||||| | ||| || || | | ||||||| | | |||||| ||||| |
Sbjct 48655 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 48600
Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699
| | || || |||| || |||||||| ||||| || || ||| ||
Sbjct 48599 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 48540
Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759
| |||||||||| | ||||| || ||||||||||| || || || | || || |
Sbjct 48539 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 48480
Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819
|| ||| || ||||| || || | | |||||||| || | ||| | |||||
Sbjct 48479 AAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 48420
Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877
|| ||| |||||||| | | | || || || || |||| |||||||
Sbjct 48419 CATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTC 48362
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
||||| || | || | || || || || |||| ||||| |||| ||||| |
Sbjct 48361 GAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTC 48302
Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996
| ||| | || ||||| || |||| ||||| || ||||| || ||||| |
Sbjct 48301 CTTAGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCT 48243
Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056
|||| ||| || ||| || ||||| | |||| || || |||| |
Sbjct 48242 TGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAG 48183
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
| |||||||| ||||| | |||||| |||| ||| ||||| || || || || |
Sbjct 48182 CAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 48123
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|| || || || ||| |||| ||| | ||| | ||| | | ||||
Sbjct 48122 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGA 48063
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233
|| || || || | | || | || || ||||||| ||| | || |
Sbjct 48062 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCA 48006
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
| | | || || | ||||||||||| |||||| | ||| || | || |
Sbjct 48005 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 47946
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| || || | |||||| || || || || | ||||||||||||||||| ||||
Sbjct 47945 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGC 47886
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||||||||||| | || | || ||||| ||||| | | ||||| || |
Sbjct 47885 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 47826
Query 111414 TCCAAA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470
||||| | || | | || | || | | ||| ||| | ||||| ||||||||||
Sbjct 47825 ACCAAAGCTTCTGAGCCTTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTT 47769
Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529
||| || || ||||| || ||||| ||| | || || || || || || ||
Sbjct 47768 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGG 47710
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
|| | |||| ||||| || | ||| || |||||||||||||| || || |||||
Sbjct 47709 CACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAA 47650
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
|| | | | || || || | | || |||| || | ||| || || ||| | |||
Sbjct 47649 AGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCA 47590
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703
|||||||| | || || ||||||||||||||||| |||| |||| || || |
Sbjct 47589 AGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGC 47530
Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
|| | ||| | || | || || || || ||| ||| || || || ||||| |||
Sbjct 47529 TTGTTA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGA 47473
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823
| ||||| | || |||||| || || || ||| | |||| | |
Sbjct 47472 ACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGG 47413
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883
||| || || |||||||| |||||| ||| || || ||||| | | || ||
Sbjct 47412 TGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTA 47353
Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943
| |||||||| | || ||||||||| | | | ||||||||| || | |||
Sbjct 47352 TCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGA 47293
Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 112001
|| ||| ||||| || ||||| | || || |||| ||| ||| | | |||| |
Sbjct 47292 GGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTG 47235
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
|||| || |||||||||||||||| ||||| || || || ||| || | ||||
Sbjct 47234 ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGA 47175
Query 112062 CCCGCATGAACATGTACTGTGGG 112084
| ||||||| ||| | ||| |||
Sbjct 47174 CTCGCATGATCATATGCTGCGGG 47152
>seq37
Length=309367
Score = 100 bits (110), Expect = 4e-16
Identities = 333/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| ||||||||||| || || ||||| ||||| |||||
Sbjct 135291 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTTTTGCCGCCAAGGGAGATGTTCTCCATG 135350
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||| || || || | | || | | | | || | | |||| ||||
Sbjct 135351 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAAC------GAGG 135404
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|||||||| | || | || ||||||| ||| | |||||||| |||| |||
Sbjct 135405 AGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGG 135464
Query 122545 TTACATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 122602
||| ||||| || || |||| ||| | | |||||| ||| || || | | |
Sbjct 135465 GCACAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAA 135522
Query 122603 TGGCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 122659
|| | ||||| | | | ||| ||| || | || | || ||| || ||
Sbjct 135523 TGTCCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GG 135579
Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719
|||| || ||| ||||||||||| || ||||| || || || || |||| ||||| |
Sbjct 135580 CAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAG 135639
Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 122778
||||||| || |||||||| | ||| | || | ||| || | ||| ||||||||||
Sbjct 135640 GCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATA 135698
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAA 122837
||||| || ||||| |||| ||| || | || |||| || | ||| | | |
Sbjct 135699 CCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAG-TTCTTATCCTGGAT 135757
Query 122838 CCATTTCATTGCCCATTTCGCCTTCTT 122864
|||| || ||||| | |||||||||
Sbjct 135758 CCATCGGATGGCCCAATCCGCCTTCTT 135784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026693129600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |