Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq643 363 2e-95
seq37 105 7e-18
>seq643
Length=117438
Score = 363 bits (402), Expect = 2e-95
Identities = 1132/1731 (65%), Gaps = 45/1731 (3%)
Strand=Plus/Minus
Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247
|||| || | ||||||||||| ||||||||||| |||||| || | |||||| |
Sbjct 48881 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 48822
Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307
| | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || |
Sbjct 48821 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 48762
Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367
|| | ||||| ||||| || ||||| | | ||| || | ||||||||| | |
Sbjct 48761 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 48702
Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425
|| ||| | ||||| | ||| | |||||| | | ||| | | | ||||
Sbjct 48701 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 48645
Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481
| || |||| | | ||||| || | | ||| || || | |||||||
Sbjct 48644 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 48585
Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537
|| ||||| |||| | | ||||||||| || ||| ||||| |||||
Sbjct 48584 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 48529
Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596
||||||| ||||| ||||| ||||| | ||||||| || | ||||| | || |||
Sbjct 48528 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTACTGGC 48470
Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656
||| ||||| || || || || ||| || || | ||| || ||||||| || |
Sbjct 48469 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 48410
Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710
||| | |||||||| ||| | | || ||||||||| || || ||
Sbjct 48409 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 48350
Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770
|||||| || || || || |||||||| || ||| | || |||||||| |||||||
Sbjct 48349 ACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTT- 48291
Query 78771 GCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829
||| ||| ||||| |||||||| | | ||||||||| |||||| ||||| |
Sbjct 48290 GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 48231
Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889
| |||| | || || | | || ||| | |||| |||| || || || || |
Sbjct 48230 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCA 48171
Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949
| || | | | || |||||||| ||||||||||| || || ||| | | | |||||
Sbjct 48170 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 48111
Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009
||| ||||||| ||||| || || ||||| |||| ||||||| || |
Sbjct 48110 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCT 48051
Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063
| ||| || | | || ||| | |||||||||| || || ||| || || |
Sbjct 48050 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAAAGAGGGCAGAGACAAGGAGGCAA 47991
Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123
||||||| || || ||| || ||| | || ||||| || ||||||| || |
Sbjct 47990 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 47931
Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181
| ||| |||||| || | |||||| ||||| ||||| || ||| ||||||||
Sbjct 47930 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTA 47873
Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241
| |||| | || | |||||||| ||| || |||| | ||| ||| | | | |
Sbjct 47872 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTG 47813
Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301
||| || | ||| | ||||| | ||||| | ||||| | | ||
Sbjct 47812 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 47753
Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361
| || || ||| || | ||||| ||||| |||| |||||||| || ||| ||
Sbjct 47752 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 47693
Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421
||| |||| || || |||||| || || |||||||| || || ||| |||||
Sbjct 47692 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 47633
Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481
|| || | |||||| | || || ||| || || || || || || | || |||
Sbjct 47632 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 47573
Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541
||||||||| ||||| || ||||||||||| | ||| |||||| || |||||||
Sbjct 47572 GGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 47513
Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601
||||| || || ||||||||||| || || |||||||| ||||| |||| || ||
Sbjct 47512 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 47453
Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659
|| || ||| ||| | || | || || | |||| | || | || ||
Sbjct 47452 ATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 47395
Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719
|| || | | |||||| || || || |||||| || |||||||| || || ||
Sbjct 47394 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAATG 47335
Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779
||| ||||||||| | || |||||||| || | ||| || | |||||||||
Sbjct 47334 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 47275
Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837
||||| | || || | || || ||||||||||| ||| ||| || | ||| ||||
Sbjct 47274 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 47217
Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888
|| ||| ||| | ||||| || ||| || || ||||| |||||||
Sbjct 47216 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 47166
Score = 340 bits (376), Expect = 2e-88
Identities = 913/1377 (66%), Gaps = 32/1377 (2%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175
||||||||||||| || || ||| || ||||| | ||| ||| |||||||||
Sbjct 47166 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 47225
Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234
|||| ||| | || ||||||||||| || || | || || | ||||||||||||||
Sbjct 47226 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 47284
Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294
| || ||| | || || ||||| || | ||||||||| ||||||||||| ||
Sbjct 47285 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 47344
Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354
|||||||| || |||||| || || || |||||| | | || ||||| || |
Sbjct 47345 ATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 47404
Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412
|| | ||||| ||| | | ||| | ||| || || || || ||
Sbjct 47405 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACCAATGGTACTTCCA 47462
Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472
|||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| |
Sbjct 47463 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 47522
Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532
| ||| || || | |||||||||||||| |||||||||||||| |||||| | |
Sbjct 47523 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCACGCCGACGTCTTCG 47582
Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592
| ||||| || || || ||| || ||| | |||||| | ||| ||| ||||| |||
Sbjct 47583 AGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 47642
Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652
|| | ||||| || || || |||||| || || |||| ||| |||||| |
Sbjct 47643 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 47702
Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712
| |||||||| |||||||||||||||| | ||| |||||| || | || | |
Sbjct 47703 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 47762
Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771
||||| | |||| || || || || ||| || ||| | | | |
Sbjct 47763 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAGCTT 47821
Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830
||| || | | || | |||| |||||||| | || | |||| |||||||||
Sbjct 47822 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 47881
Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888
| | || | || |||| || || |||||| | || | ||| ||| |||||||||
Sbjct 47882 CACTGCAATCG-CAAGAGTAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 47938
Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948
|| ||||| ||||| || | | || || ||| || || || || || || |||
Sbjct 47939 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 47998
Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002
||| ||||| ||||| ||| | | | | || |||||| || || ||
Sbjct 47999 TTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 48058
Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062
||||| || | ||||| || ||| |||| ||||||| ||| |||||
Sbjct 48059 GAGGTCACTCAAGTCGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 48118
Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122
| | | ||| || || || ||||| ||||| || || | | || || || ||
Sbjct 48119 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 48178
Query 20123 CTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTC 20182
|| || || | ||| | ||| || | | || || ||| |||| || |||||
Sbjct 48179 CTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTG 48238
Query 20183 AACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCGC 20241
|||||| ||||||||| || | |||||||| |||| | || |||| |||||||
Sbjct 48239 AACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACGTCTGTGC-AACTCGC 48297
Query 20242 CAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCA 20301
|| ||||| || || ||| || |||||||| || || || || |||||||| |||||
Sbjct 48298 TAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCA 48357
Query 20302 GCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTTG 20354
| ||||||||| |||| |||| || | | ||| | ||||| | |
Sbjct 48358 GTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAGG 48416
Query 20355 AGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGA 20414
| ||||||| ||||| | |||||| ||||||| || || ||||| |||||| |
Sbjct 48417 ATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGTA 48476
Query 20415 CCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470
| | ||||| | || ||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 48477 CTTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 48532
>seq37
Length=309367
Score = 105 bits (116), Expect = 7e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
||||| || ||||| | |||||||| ||| || || ||||||||| || | ||
Sbjct 135736 TTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 135677
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || ||||||||||| ||||||||||||||||| || ||||| || || ||||||
Sbjct 135676 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 135617
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118
|| ||||| || || ||||| || ||
Sbjct 135616 CTCATTTCTCGTGATGAGGGTCTTCA 135591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520164965440
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