Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717825.1_202016-08-31]
676 sequences; 36,468,289 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq643 176 6e-39
seq37 140 5e-28
>seq643
Length=117438
Score = 176 bits (194), Expect = 6e-39
Identities = 1162/1846 (63%), Gaps = 43/1846 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || || | || || | | |||||| || |||||||| ||||| || |||
Sbjct 48909 GTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGA 48850
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| || ||| |||||||| || | ||| |||| || ||
Sbjct 48849 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATG 48790
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
||||| || | |||||| ||||| ||||| || || | ||||| ||||| | | |
Sbjct 48789 TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 48730
Query 76962 ATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 77020
| ||| | ||| ||| ||||| | ||| ||| | | ||||| || | || |
Sbjct 48729 ACCTGTCGCT-GAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGAT 48671
Query 77021 GTTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077
||| | | || || || ||||| ||| | || || ||||| ||| ||||
Sbjct 48670 GTTGGGGATGTTCTGGATAGAACCGTTATCAGCAATGATGCGGTTCTTCATAGCATCGGA 48611
Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137
||| | | | || | | | | || || || || || | || || || ||
Sbjct 48610 CCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCC 48551
Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197
|| | |||| || ||| || || ||| || || || | |||| ||||| ||
Sbjct 48550 AGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCC 48491
Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257
| ||| || | |||| || || |||||||| || || | | ||| || | || |||
Sbjct 48490 AAGAATCTGCGAAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACC 48431
Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317
|| || ||| | ||| || || ||| |||||||| || || || ||||
Sbjct 48430 GTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATT 48371
Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGG 77377
||| | ||| | || ||||| || | | ||| || || || | || || ||
Sbjct 48370 CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 48311
Query 77378 TCCTTCTGTTTCAGCTAGTT-CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGA 77436
||||| | ||| |||| |||| || | || ||| || || || ||||
Sbjct 48310 ACCTTCCTCCTTAGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGA 48252
Query 77437 AAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG--AAT 77494
| || | ||| || || || | || ||| | ||||| || ||| | | ||
Sbjct 48251 AGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGC--ATGCGGAGGGCAAG 48194
Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554
|||||||| || | || || || |||| |||||| |||| || | | | ||| |
Sbjct 48193 GAAGGCATCAGCAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTT 48134
Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614
||| ||| | | ||| || | || | ||| || || || || | ||| | |||||
Sbjct 48133 ACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAAC 48074
Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCT--ATA----ACAAA 77668
|||| | || || | || || || || | | ||||| ||| | ||
Sbjct 48073 GACTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAA 48014
Query 77669 CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728
| || || | || || || || ||||| || ||||||| || | | ||||
Sbjct 48013 AGAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTC 47954
Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788
|| ||||| || || || || | | ||| || || || || | |||||| |||||
Sbjct 47953 AATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTT 47894
Query 77789 TTTATTGCA-TGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGA 77847
|||||| ||| ||||| || || || || || | ||||| || |||| | || |
Sbjct 47893 GCGATTGCAGTGA-TCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAA 47835
Query 77848 TAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCT---CTCTCTT 77903
||| | | ||| | | ||| ||| || || ||| ||| | | | ||||||
Sbjct 47834 GAATGGCGTACCAAA-GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTC 47779
Query 77904 TCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961
|| || || ||| | |||| |||||||| || || | ||| | | |||||||
Sbjct 47778 TCGTACTTTTCGTACAGAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGC 47721
Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021
|||| || |||||||| | | ||| || || | | || || || ||||| || ||||
Sbjct 47720 ATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGAT 47661
Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081
|||| ||||| ||||| | || || || || | | || || || || |||||
Sbjct 47660 CAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCT 47601
Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141
|| ||||| || ||||| | | || | |||||||| || || || || || |
Sbjct 47600 TTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGG 47541
Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201
| |||||||| || ||||| ||||| || | || | || ||||| || | || | ||
Sbjct 47540 CACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCA 47481
Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261
||| |||| |||||||| || || ||||| || || | || ||| ||| | || |
Sbjct 47480 GCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCAC 47421
Query 78262 GAATATTACTAATGGAT-ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320
| || | | | | | || || || || |||||||| || || | || |||
Sbjct 47420 GGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 47362
Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380
|| | |||||||||||||| || || ||||| ||| |||| | || ||| || ||
Sbjct 47361 TTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAT 47302
Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440
|| | ||| | || ||| || || || ||||| || || |||||| || || |
Sbjct 47301 GAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAAC 47242
Query 78441 TTTTCAGAAAGTAGATTGTATGT-TTCAATA---GCTGATTCTATGTC-CCATTGATGAA 78495
|| || | || |||||||| | ||| | ||| | | | ||| || | |
Sbjct 47241 TTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATAT-CGTCACCCCAG----A 47187
Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555
|||| || || || ||||| | ||||||||| || | ||| | | || | || |
Sbjct 47186 TTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCT 47127
Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
| |||||||||| | ||| ||| || ||||||||||||||
Sbjct 47126 GTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTA 47081
>seq37
Length=309367
Score = 140 bits (154), Expect = 5e-28
Identities = 369/561 (66%), Gaps = 12/561 (2%)
Strand=Plus/Plus
Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199
||| ||||| || |||||||| ||||| | | ||| | ||||||||||| | ||
Sbjct 135575 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 135634
Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259
||| ||||| || ||||| || |||||||| || || | || || | || |||||
Sbjct 135635 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 135694
Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316
|| || || ||||| ||||| || ||| | || | | | | | || | |
Sbjct 135695 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 135754
Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 48376
||||| || |||||||| |||||||| | ||||| || || || | || ||
Sbjct 135755 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 135814
Query 48377 AAAGAGAAAGtttttttCATTGCTA---TCTTTAACGTAAGTATCTATTAAAAGACTATA 48433
||||| || | | | | | || || | ||| ||||| || | || ||
Sbjct 135815 GAAGAG---GTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 135871
Query 48434 CATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGT 48493
|||||||||| || || || || ||||| || || || || |||| || || |
Sbjct 135872 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGG 135931
Query 48494 GATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGC 48553
|||||| ||||| | ||||| ||| | | ||||||||| || || || || ||
Sbjct 135932 GATCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGC 135991
Query 48554 AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATT 48610
||| || || || | | || || || |||| |||| ||||||| | || ||
Sbjct 135992 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTT 136051
Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|||||| | || ||| || || | ||| | || ||||||||||| || || ||||||||
Sbjct 136052 CCAGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGC 136111
Query 48671 TTTTTTATACATATTCCATAT 48691
|| || ||||| | ||| ||
Sbjct 136112 CTTCTTGTACATTTGCCAGAT 136132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694662930048640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |