Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq119 109 1e-18 >seq119 Length=1526710 Score = 109 bits (120), Expect = 1e-18 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 ||||||| || ||| ||| | || ||| ||| | ||||||||| | | || ||| Sbjct 629863 AGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGA 629804 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 ||||||||||||||||| || || || | | ||||| || | ||||| |||| Sbjct 629803 AGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGNN---GAGAAGGTGT 629747 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| || | ||||| || | || |||||| ||| || ||| || || ||||||| Sbjct 629746 ACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAAACCAACT 629687 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||| || |||||| |||| | | ||||| Sbjct 629686 TCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 629647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820110182810