Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq119 109 1e-18
>seq119
Length=1526710
Score = 109 bits (120), Expect = 1e-18
Identities = 156/220 (71%), Gaps = 3/220 (1%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
||||||| || ||| ||| | || ||| ||| | ||||||||| | | || |||
Sbjct 629863 AGGAGTTTCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGA 629804
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
||||||||||||||||| || || || | | ||||| || | ||||| ||||
Sbjct 629803 AGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTTGCTCTCGNN---GAGAAGGTGT 629747
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|||| || | ||||| || | || |||||| ||| || ||| || || |||||||
Sbjct 629746 ACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAAACCAACT 629687
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||||||| ||||| || |||||| |||| | | |||||
Sbjct 629686 TCTTCGAGAAGCGCGTTGCTGACTACCAGAAGGCCGGTGT 629647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057820110182810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |