Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq257 104 3e-17
>seq257
Length=364032
Score = 104 bits (114), Expect = 3e-17
Identities = 402/636 (63%), Gaps = 43/636 (7%)
Strand=Plus/Plus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
|| |||| ||| |||| || ||||| | |||||| || || || || |||| ||| |||
Sbjct 247569 AGTTGGACCTTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 247628
Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791
| | | || || | || | || ||| || | ||||| |||||||| | ||||
Sbjct 247629 GTAAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 247688
Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| || ||||||||||| || ||||| |||||||| | || || || || | ||| |||
Sbjct 247689 CTAGCAATGTTGAAGGGAACGCCCAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 247748
Query 145852 -GA------------------------GAGCTCCCCGCC--------------CGCCACG 145872
|| ||| || | || | |||
Sbjct 247749 TGAAGGTGTCCTTGGGGCTTCGCCTCTGAGTTCTCGTCCTTGCTTCGGGGATAGGATACG 247808
Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932
||||||||| | | ||| || ||||| || |||| || ||| || ||||||
Sbjct 247809 TAGAACTGGGCAAACATGTGACAAGGCGGTAGAACCATCTTCTTCATGTCGGCAGGGTTC 247868
Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992
||||| | || || | | | | | ||||| | | || || | ||
Sbjct 247869 CAGGCAGAAAGAACTAAGCGGCGGTCATAAGGGTTGGTTCGTAGCTTGTGAATGATCTCG 247928
Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCG 146052
|||||||| |||||||| || ||||||||||||| || |||||| | || ||
Sbjct 247929 GCAAGCTGGTCTACGCCCTGGCCGGTATAATCTGTCTTGGCATCGACGTACTCAGCGCCA 247988
Query 146053 AAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGC 146112
||||||| ||| ||||| ||||| || || || ||||| ||| ||| | || ||
Sbjct 247989 AAGTGCCGCCATTGGAAGCCGTATACAGGACCTAGGTCGCCGACCTCACGATGTTGAAGA 248048
Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170
|| |||| || || || || ||||| | ||||||||||||| || ||||
Sbjct 248049 CCAAGGTTATCGAGAAATTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCA 248108
Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230
| |||| ||| ||||| ||| ||| ||||||||||| ||||| | | |||
Sbjct 248109 CTGAGA-CTC-TTGGAAGAGGTGTTACCCTCAATGAACCAGAGGAGCTCGGCAATGACGG 248166
Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| | |||||| | ||| ||||| || |||||||
Sbjct 248167 CGCGAGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 248202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590074683099480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |