Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq257 104 3e-17 >seq257 Length=364032 Score = 104 bits (114), Expect = 3e-17 Identities = 402/636 (63%), Gaps = 43/636 (7%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 || |||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 247569 AGTTGGACCTTGAGGGCATCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 247628 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || || | || | || ||| || | ||||| |||||||| | |||| Sbjct 247629 GTAAGGCTTCCAGGGACCAGCTCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 247688 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| |||||||| | || || || || | ||| ||| Sbjct 247689 CTAGCAATGTTGAAGGGAACGCCCAGACCCATGTCGCAAGATCGTTGATATAACTGACAG 247748 Query 145852 -GA------------------------GAGCTCCCCGCC--------------CGCCACG 145872 || ||| || | || | ||| Sbjct 247749 TGAAGGTGTCCTTGGGGCTTCGCCTCTGAGTTCTCGTCCTTGCTTCGGGGATAGGATACG 247808 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||| | | ||| || ||||| || |||| || ||| || |||||| Sbjct 247809 TAGAACTGGGCAAACATGTGACAAGGCGGTAGAACCATCTTCTTCATGTCGGCAGGGTTC 247868 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992 ||||| | || || | | | | | ||||| | | || || | || Sbjct 247869 CAGGCAGAAAGAACTAAGCGGCGGTCATAAGGGTTGGTTCGTAGCTTGTGAATGATCTCG 247928 Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCG 146052 |||||||| |||||||| || ||||||||||||| || |||||| | || || Sbjct 247929 GCAAGCTGGTCTACGCCCTGGCCGGTATAATCTGTCTTGGCATCGACGTACTCAGCGCCA 247988 Query 146053 AAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGC 146112 ||||||| ||| ||||| ||||| || || || ||||| ||| ||| | || || Sbjct 247989 AAGTGCCGCCATTGGAAGCCGTATACAGGACCTAGGTCGCCGACCTCACGATGTTGAAGA 248048 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170 || |||| || || || || ||||| | ||||||||||||| || |||| Sbjct 248049 CCAAGGTTATCGAGAAATTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCA 248108 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | |||| ||| ||||| ||| ||| ||||||||||| ||||| | | ||| Sbjct 248109 CTGAGA-CTC-TTGGAAGAGGTGTTACCCTCAATGAACCAGAGGAGCTCGGCAATGACGG 248166 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | |||||| | ||| ||||| || ||||||| Sbjct 248167 CGCGAGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 248202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074683099480