Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq180 149 8e-31
seq119 136 5e-27
>seq180
Length=606450
Score = 149 bits (164), Expect = 8e-31
Identities = 625/972 (64%), Gaps = 16/972 (2%)
Strand=Plus/Minus
Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 65800
|| || || || ||||| || ||||||| || | ||| |||| || |||||||||||
Sbjct 290652 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGC-GCAGTATTCAATGATCTCAGTGCA 290594
Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860
|| || | |||||| || | || | ||| |||||||| || || |||
Sbjct 290593 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATC 290534
Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920
||| || || ||||| || | || || || |||| | || | ||| || | ||| |
Sbjct 290533 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 290475
Query 65921 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACA 65976
| || ||||||| || ||| ||| | ||| ||||| ||||| | ||||
Sbjct 290474 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 290418
Query 65977 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATC 66035
|| || ||||| || | || | ||| ||||| ||||| | || |||||
Sbjct 290417 GAGCCTCAAATTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATG 290359
Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095
| | ||| || |||| || || || ||||| || |||||||| ||||||||||||
Sbjct 290358 AGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCT 290299
Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155
| || | || | | | ||||| || || ||||||| ||||| ||||||
Sbjct 290298 AAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAAC 290239
Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215
| | | || ||||| || || | ||| ||||| | | ||||| || |||||
Sbjct 290238 TCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA 290179
Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275
|| ||||| || | ||| | ||| ||||| || | || | || ||| |||| |||||
Sbjct 290178 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCG 290119
Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335
||||| ||||||||||| |||| ||| || ||| | ||||| || | | | |
Sbjct 290118 TTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGTT 290060
Query 66336 -AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
| || || || || ||||| || || || | || || || | ||||| |||||
Sbjct 290059 CAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGAT 290000
Query 66395 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 66454
|| || || || || ||| |||| | || || || || || | || | |
Sbjct 289999 ACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGG 289940
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
||| || || || ||||| || || || || || || | || || | || ||
Sbjct 289939 AGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTT 289880
Query 66515 GTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTA 66573
||| ||||| | | || ||||| || | ||||| || ||||| ||||| |
Sbjct 289879 GTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG-ATTCCAACAGCGACTCGCATGA 289821
Query 66574 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 66633
||| ||||| || | ||| | || ||| || || | | |||||| ||| | ||
Sbjct 289820 TCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGACA 289761
Query 66634 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 66693
| ||| || |||||||||||||| ||||| || || || | ||| | |||| ||
Sbjct 289760 AGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCATAGACAATCGCTGAGTCGA 289701
Query 66694 GTTTATCCTTAT 66705
||| || ||||
Sbjct 289700 GTTCCTCTTTAT 289689
>seq119
Length=1526710
Score = 136 bits (150), Expect = 5e-27
Identities = 368/559 (66%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216
||| || || ||| ||| |||||||| || | | ||| | ||||| ||||| | ||
Sbjct 629943 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 630002
Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276
|| ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||
Sbjct 630003 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 630062
Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 36333
|| || || || || ||||| |||| ||| | || || | | | | || ||
Sbjct 630063 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 630122
Query 36334 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392
||||| | || |||||||| ||||||||| | ||||| || || || | || |
Sbjct 630123 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 630181
Query 36393 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452
| ||||| || | | | || || | || ||||| || | || ||
Sbjct 630182 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATG 630241
Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512
|||| || || ||||| || || || || || || ||||| |||| |||||||| |
Sbjct 630242 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 630301
Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572
|||| || || | ||||| || | | ||| ||||| || || ||||| ||| |
Sbjct 630302 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 630361
Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCC 36629
| || || || | | || || || |||| |||| || || | | || ||||
Sbjct 630362 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 630421
Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689
| || | || ||| || || | ||| | || || ||||||| || || ||||||||||
Sbjct 630422 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 630481
Query 36690 TTTTATACATATTCCAGAT 36708
| || ||||| | ||||||
Sbjct 630482 TCTTGTACATTTGCCAGAT 630500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658170438805080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |