Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq180 176 6e-39
seq119 163 4e-35
>seq180
Length=606450
Score = 176 bits (194), Expect = 6e-39
Identities = 631/973 (65%), Gaps = 18/973 (2%)
Strand=Plus/Minus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCA 79679
|| || || || ||||| || ||||||| || | ||| |||| || || ||||||||
Sbjct 290652 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGC-GCAGTATTCAATGATCTCAGTGCA 290594
Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739
||||| | ||||| || | || | ||| |||||||| || || |||
Sbjct 290593 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATC 290534
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| || || ||||| || | || || || |||| | || | ||| || | ||| |
Sbjct 290533 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 290475
Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCTCTTT---TCTCTTTCGTATTGT--GTATA 79853
| || ||||||| || ||||||| | ||| ||||| ||||| | | ||| |
Sbjct 290474 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 290418
Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| | || || ||||| || | || | | ||||| ||||||| ||| |||||
Sbjct 290417 GAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACAT 290360
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
| | ||| || || | || || || ||||| || |||||||| |||||||||||
Sbjct 290359 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 290300
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| || || || | | | |||||| || || ||||||| ||||| |||||
Sbjct 290299 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAA 290240
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| | | | || | ||||| || || | ||| ||||| | | || ||||| |||||
Sbjct 290239 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 290180
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| || | || | || ||| |||| |||||
Sbjct 290179 ACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACC 290120
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
||||| ||||||||||| |||| ||| || ||| ||||||| || | | |
Sbjct 290119 GTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGT 290061
Query 80214 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| | || || || || ||||| || || || | || || || | ||||| ||||
Sbjct 290060 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGA 290001
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| || || |||| | || || || || || | || | |
Sbjct 290000 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 289941
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
||| || || || ||||| || || || || || || | || |||| || |
Sbjct 289940 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGT 289881
Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451
|||| ||||| | | || ||||| || | ||||| || ||||| |||||
Sbjct 289880 TGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG-ATTCCAACAGCGACTCGCATG 289822
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
| ||| ||||| || | ||| | || ||| | || | | |||||| ||| | |
Sbjct 289821 ATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGAC 289762
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571
|| ||| || |||||||||||||| ||||| || || || | ||| | |||| |
Sbjct 289761 AAGGTTCGGAAGCCAAAATAGTTGTAGTTGAAGTCGCGATCATAGACAATCGCTGAGTCG 289702
Query 80572 AGTTTATCCTTAT 80584
|||| || ||||
Sbjct 289701 AGTTCCTCTTTAT 289689
>seq119
Length=1526710
Score = 163 bits (180), Expect = 4e-35
Identities = 374/559 (67%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| || || ||| ||| |||||||| || | | ||| || ||||| ||||| | ||
Sbjct 629943 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 630002
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||
Sbjct 630003 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 630062
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATG 50135
||| || || || || ||||| |||||||| | || || | | | | | || ||
Sbjct 630063 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 630122
Query 50136 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194
||||| | || |||||||| ||||||||| | ||||| || || || | ||| |
Sbjct 630123 GATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGT 630181
Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254
| ||||| || | | | || || | || |||||||| | || ||
Sbjct 630182 TGAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATG 630241
Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314
|||| || || ||||| || || ||||| || || ||||| |||| |||||||| |
Sbjct 630242 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 630301
Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374
|||| || || | ||||| ||| | | ||| ||||| || || ||||| ||| |
Sbjct 630302 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 630361
Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGT---TAGTTTATTCC 50431
| || || || | | || || || | || |||| | || | | || ||||
Sbjct 630362 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 630421
Query 50432 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491
| || | || ||| || || | ||| | || || ||||||| || || ||||||||||
Sbjct 630422 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 630481
Query 50492 TTTTATACATATTCCAGAT 50510
| || ||||| | ||||||
Sbjct 630482 TCTTGTACATTTGCCAGAT 630500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266223210680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |