Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq119 268 1e-66 seq180 109 8e-19 >seq119 Length=1526710 Score = 268 bits (296), Expect = 1e-66 Identities = 571/844 (68%), Gaps = 26/844 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||||||||| ||||| | || ||| ||||||| Sbjct 630500 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 630441 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || |||||| | |||| | | || || || Sbjct 630440 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 630381 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 |||||| | || ||||| || | |||||| || |||||||| || ||||| ||||| || Sbjct 630380 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAG-CG 630322 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| ||| | || || |||| ||| ||||| || || ||||| ||||||| Sbjct 630321 ATTCAGCGGCGAGGTCCAGATCCCCGAGGC-TCGATGCTTCTATGGTTTCCAGATCATGA 630263 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG- 125315 | |||||| | ||||| |||| ||||| || || || | ||||| || || Sbjct 630262 TGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCCTG 630203 Query 125316 --CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || |||| | || ||||| ||||| | ||||| | || | || || || |||| Sbjct 630202 CCCAGCGTACATAC---CTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGG 630146 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| || || |||||| | || | || ||| | | || | | || || | Sbjct 630145 CGGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTG 630086 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | || || ||||| ||||| |||||||| ||| ||||| ||||||| ||||||| Sbjct 630085 CTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCA 630026 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || |||||||| || |||| ||||||| | || ||||| || |||| Sbjct 630025 AGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 629966 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 | || ||| ||||||||| ||| || | ||| | | | | || | | Sbjct 629965 GTCTTCACACCGACTTTGCCTGTCTCCT------CCACTCT---CACCTCAAGGGACGTG 629915 Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 ||||| | | | | || ||||| | ||||||||||| || || || ||||||| Sbjct 629914 CCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTC 629855 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | || | |||||||||| ||| || ||| |||||| Sbjct 629854 TTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACA 629795 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGAT-TGGCCG-CAAGATTTACAACGC 125791 | || || || || |||||||| || |||| | | | | ||| | ||||| | Sbjct 629794 TCGAATTCGTCGCTGATCGTCTCCT-----CGTTGCTCTCGNNGAGAAGGTGTACAAGTC 629740 Query 125792 CAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851 || || || || || |||||| | ||| || || | || || |||||||| ||||| Sbjct 629739 CACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAAACCAACTTCTTCGA 629680 Query 125852 GAAG 125855 |||| Sbjct 629679 GAAG 629676 >seq180 Length=606450 Score = 109 bits (120), Expect = 8e-19 Identities = 320/488 (66%), Gaps = 10/488 (2%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || || | ||| ||||| | || || Sbjct 290159 CGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCA 290218 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| || || || | || | || || || || || |||| Sbjct 290219 TGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTC 290278 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043 || || | ||| |||| | || || ||| | || ||| | ||||||||||| ||| | Sbjct 290279 CGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAG 290338 Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103 ||| | |||| || |||||||| || | || || || | || |||| Sbjct 290339 AGAAACGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTAC 290398 Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGA 97163 || || || |||||||| |||| |||||| |||||| || | | | | Sbjct 290399 GGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGG----TAAGGGTCGCAA 290454 Query 97164 GTCGATGCACG---AGAA-CTGTGGAAGGCCAT-CGTGACGGCTCAGGTAGAGACTGGAA 97218 ||| || | | |||| || ||| | ||||| | ||| ||| ||| |||||| |||| Sbjct 290455 GTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA-GGCCCAGACAGAGACCGGAA 290513 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| |||||||||||| | |||||||| || |||||| || | || | Sbjct 290514 ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTA 290573 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 ||||| ||||||| |||||||| || || | || ||| | | || || ||| | Sbjct 290574 CCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCG 290633 Query 97339 CAGTTTGC 97346 | |||||| Sbjct 290634 CTGTTTGC 290641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056541450120