Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq180 378 2e-99 seq119 98.7 3e-15 >seq180 Length=606450 Score = 378 bits (418), Expect = 2e-99 Identities = 1147/1741 (66%), Gaps = 46/1741 (3%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | ||| Sbjct 289796 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 289855 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| | | || ||||| || || | | | || || | ||||| || || | Sbjct 289856 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 289913 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 || || | | ||| || || |||| | || ||| | || || ||||| ||| | Sbjct 289914 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 289973 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || |||| |||||| | |||| Sbjct 289974 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 290033 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737 |||||| || || || ||||| | | || |||| | ||||| || | | ||| Sbjct 290034 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 290091 Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || || |||| | || || | ||||||||||| |||||||| ||| Sbjct 290092 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 290150 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 | ||||| | ||||| ||||||||||| ||||| || || || || || || | Sbjct 290151 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 290210 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915 | ||||| || ||||| | || ||||| ||||| ||||| || || ||||| || Sbjct 290211 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 290269 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 ||||| | || || ||||| ||||||| || |||||| | |||| | ||| |||||| Sbjct 290270 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 290329 Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 || || ||| | | |||| || | ||| | ||||| ||||||| || || ||| | Sbjct 290330 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 290388 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 || | |||||||| | || ||||| ||||||||||| || ||||| |||| Sbjct 290389 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 290448 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 ||| ||| | || || |||||||| |||| ||||| | || | |||| ||||| Sbjct 290449 TCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 290508 Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 |||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || ||| Sbjct 290509 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 290567 Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 ||||||| | || | || |||||| || || ||||| ||||||||| ||| || || Sbjct 290568 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 290626 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326 ||| || || || |||||||| || | | || || | || | | ||||| Sbjct 290627 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGAT 290686 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384 | | | ||| | || | || | || || || | || | | | ||||| | Sbjct 290687 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCC--GCAATTTGA 290744 Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439 ||||| | |||||| || | || || | | || || || ||| || || Sbjct 290745 ACAAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACAT 290799 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 |||||| || || |||||||||||||| || || || ||||| | || | ||| Sbjct 290800 GCGTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCG 290859 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 ||| | ||||| || ||||| ||||||| || || ||| | ||||| || || || || Sbjct 290860 CATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTA 290919 Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618 || || | ||| | || |||| | | || || | || ||||| || | Sbjct 290920 CCACGCTGCCCTTACTACGTC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCT 290978 Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678 |||| |||||| || |||| | ||||||| || | |||||||||| ||| | Sbjct 290979 TCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCT 291038 Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737 ||| || ||| ||||||| | || || | || |||| || |||| |||||| Sbjct 291039 CTGACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 291098 Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 || |||||| || || ||||| || || |||| | ||||| || || ||||||| Sbjct 291099 GTCTGCTCGTT---GCTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACG 291155 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 | ||||| || || | || ||| | || |||||| || ||| | || || || | Sbjct 291156 AATGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 291215 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 ||| || || | || ||||||||||| |||| || || ||| || | Sbjct 291216 AGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTA 291275 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975 |||||||| ||||| || | ||| |||||| | |||||||| || | || | | Sbjct 291276 TGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 291335 Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035 | | ||| || | ||||| || || ||||| ||||| |||| | | | |||| Sbjct 291336 AGATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 291395 Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095 | || || || ||||| || || |||| ||||| | ||| | ||||| | | Sbjct 291396 CTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 291455 Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155 | ||| | |||| | || |||||| ||| || ||||| |||||| ||||| | Sbjct 291456 CTACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTG 291515 Query 365156 G 365156 | Sbjct 291516 G 291516 >seq119 Length=1526710 Score = 98.7 bits (108), Expect = 3e-15 Identities = 310/468 (66%), Gaps = 23/468 (5%) Strand=Plus/Minus Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249 |||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || || Sbjct 630400 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 630341 Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308 ||||||||| || || ||| || | || | || ||| ||||| |||| ||| Sbjct 630340 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 630282 Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368 |||||| | || || ||||| || || | ||| | |||||||| || || | Sbjct 630281 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 630230 Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419 ||| ||| || | || ||| || | || || | || | ||| ||| || | Sbjct 630229 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 630171 Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477 || |||| | || || ||||| |||||||| | |||||| | || |||| Sbjct 630170 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 630111 Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536 | | || || | |||||| |||| ||||||| ||||| || || ||||| || Sbjct 630110 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 630051 Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596 || ||| | | ||||| ||||| || || |||| | ||||| ||||| | ||||| Sbjct 630050 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 629991 Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||| | ||| || |||||||||||||| ||||| ||||| ||| Sbjct 629990 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 629943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348807324434