Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq180 378 2e-99
seq119 98.7 3e-15
>seq180
Length=606450
Score = 378 bits (418), Expect = 2e-99
Identities = 1147/1741 (66%), Gaps = 46/1741 (3%)
Strand=Plus/Plus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| ||| ||||||||||||||| | ||||| || ||| |||| ||| | |||
Sbjct 289796 ATTGCTGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGAT 289855
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| | | || ||||| || || | | | || || | ||||| || || |
Sbjct 289856 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCAA 289913
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|| || | | ||| || || |||| | || ||| | || || ||||| ||| |
Sbjct 289914 GCCCCACTTTATTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTG 289973
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || ||| || ||||||| || || || |||| |||||| | ||||
Sbjct 289974 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTT 290033
Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
|||||| || || || ||||| | | || |||| | ||||| || | | |||
Sbjct 290034 CCAAGATGGCTGGTGGTATTGGCTTGAACGC-CCACCGAATCCGTGCCACTGG-CTCTTA 290091
Query 363738 CATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || || |||| | || || | ||||||||||| |||||||| |||
Sbjct 290092 CATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACA 290150
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
| ||||| | ||||| ||||||||||| ||||| || || || || || || |
Sbjct 290151 ACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACC 290210
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAA 363915
| ||||| || ||||| | || ||||| ||||| ||||| || || ||||| ||
Sbjct 290211 TTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG- 290269
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
||||| | || || ||||| ||||||| || |||||| | |||| | ||| ||||||
Sbjct 290270 GAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAG 290329
Query 363976 CGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
|| || ||| | | |||| || | ||| | ||||| ||||||| || || ||| |
Sbjct 290330 CGTGTCGAGAGAAACGGCGAAT-GGACTCTCATGTGCCCTAACGAATGCCCTGGCCTTGC 290388
Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094
|| | |||||||| | || ||||| ||||||||||| || ||||| ||||
Sbjct 290389 TGACTGCTACGGTGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGGG 290448
Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154
||| ||| | || || |||||||| |||| ||||| | || | |||| |||||
Sbjct 290449 TCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGAC 290508
Query 364155 AGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
|||| ||||| | ||| | ||||| ||| ||||| |||||| ||||| || |||
Sbjct 290509 CGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACC 290567
Query 364214 TTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
||||||| | || | || |||||| || || ||||| ||||||||| ||| || ||
Sbjct 290568 TTGGTACCA-TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGAT 290626
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326
||| || || || |||||||| || | | || || | || | | |||||
Sbjct 290627 GAGGTCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGAT 290686
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384
| | | ||| | || | || | || || || | || | | | ||||| |
Sbjct 290687 GCTTGCTACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCC--GCAATTTGA 290744
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439
||||| | |||||| || | || || | | || || || ||| || ||
Sbjct 290745 ACAAGATCATCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGC-----AACAT 290799
Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499
|||||| || || |||||||||||||| || || || ||||| | || | |||
Sbjct 290800 GCGTCACCGACCCATTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCG 290859
Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
||| | ||||| || ||||| ||||||| || || ||| | ||||| || || || ||
Sbjct 290860 CATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTA 290919
Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618
|| || | ||| | || |||| | | || || | || ||||| || |
Sbjct 290920 CCACGCTGCCCTTACTACGTC-TGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCT 290978
Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678
|||| |||||| || |||| | ||||||| || | |||||||||| ||| |
Sbjct 290979 TCAAGGGCTCCCCTGCCTCTGAGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCT 291038
Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737
||| || ||| ||||||| | || || | || |||| || |||| ||||||
Sbjct 291039 CTGACCTTTGGGACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 291098
Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795
|| |||||| || || ||||| || || |||| | ||||| || || |||||||
Sbjct 291099 GTCTGCTCGTT---GCTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACG 291155
Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855
| ||||| || || | || ||| | || |||||| || ||| | || || || |
Sbjct 291156 AATGCTTTGAGCCTTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 291215
Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915
||| || || | || ||||||||||| |||| || || ||| || |
Sbjct 291216 AGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTA 291275
Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975
|||||||| ||||| || | ||| |||||| | |||||||| || | || | |
Sbjct 291276 TGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 291335
Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035
| | ||| || | ||||| || || ||||| ||||| |||| | | | ||||
Sbjct 291336 AGATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 291395
Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095
| || || || ||||| || || |||| ||||| | ||| | ||||| | |
Sbjct 291396 CTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 291455
Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155
| ||| | |||| | || |||||| ||| || ||||| |||||| ||||| |
Sbjct 291456 CTACCATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACTG 291515
Query 365156 G 365156
|
Sbjct 291516 G 291516
>seq119
Length=1526710
Score = 98.7 bits (108), Expect = 3e-15
Identities = 310/468 (66%), Gaps = 23/468 (5%)
Strand=Plus/Minus
Query 22190 ACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTT 22249
|||| ||| | || ||| | ||||| || ||||| ||| || | ||||| || ||
Sbjct 630400 ACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCA 630341
Query 22250 TTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTC 22308
||||||||| || || ||| || | || | || ||| ||||| |||| |||
Sbjct 630340 ATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATGCTTC 630282
Query 22309 TATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAG 22368
|||||| | || || ||||| || || | ||| | |||||||| || || |
Sbjct 630281 TATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCC------CTCC-- 630230
Query 22369 TCACTCG-TAGA-AGATAAAG-AC---GAACAACGAA---ACTTATTCCGCGCGATTCGC 22419
||| ||| || | || ||| || | || || | || | ||| ||| || |
Sbjct 630229 TCA-TCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGAC 630171
Query 22420 ACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAAC 22477
|| |||| | || || ||||| |||||||| | |||||| | || ||||
Sbjct 630170 ACTATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAAC 630111
Query 22478 GTT-CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGA 22536
| | || || | |||||| |||| ||||||| ||||| || || ||||| ||
Sbjct 630110 TCTACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 630051
Query 22537 GCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA 22596
|| ||| | | ||||| ||||| || || |||| | ||||| ||||| | |||||
Sbjct 630050 GCCTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCT 629991
Query 22597 AATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644
|| ||| | ||| || |||||||||||||| ||||| ||||| |||
Sbjct 629990 AACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCCTGT 629943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303348807324434
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |