Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq164 140 2e-28 seq119 105 4e-18 >seq164 Length=7734 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3388 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3329 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3328 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3294 >seq119 Length=1526710 Score = 105 bits (116), Expect = 4e-18 Identities = 204/297 (69%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252 || || ||||| || ||||| ||| ||| ||||| ||||| |||| || || |||| Sbjct 694558 GATGCTTTCTATCGTTACAAGATGGAGCG--TCTGCAGACCAAGATCGAAGGCAAAGGAA 694501 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGGACGCCC 6310 |||||||||| ||||| |||||||| | | | | || || | |||| || || Sbjct 694500 ACGGTATTAAGACCGTTGTTGTCAACCT--CAGCAGTGTAGCAGCCTCACTCGCCCGTCC 694443 Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370 | | ||||| | || || ||||| | ||||||||| ||||| || | |||| | Sbjct 694442 CGGCTCCTACGTCATCAAGTACTTCGGTTTCGAACTTGGTGCTCAAACCAACATTGACCC 694383 Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430 ||| |||| || | ||| | ||||| | || | || ||||||| ||||| || Sbjct 694382 CAAGGACGACCGTTGGATCATCAACGGTGCCCACGATGCTCCCAAGCTTCAGGATCACCT 694323 Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || ||||| || ||||||||| || ||| | ||| | ||||| |||||||| Sbjct 694322 CGATGGCTTCATCAACAAGTTTGTTCTCTGTAAAAAGTGCAAGAACCCCGAGACCGA 694266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946028417497