Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq164 140 2e-28
seq119 105 4e-18
>seq164
Length=7734
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3388 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3329
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3328 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3294
>seq119
Length=1526710
Score = 105 bits (116), Expect = 4e-18
Identities = 204/297 (69%), Gaps = 8/297 (3%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252
|| || ||||| || ||||| ||| ||| ||||| ||||| |||| || || ||||
Sbjct 694558 GATGCTTTCTATCGTTACAAGATGGAGCG--TCTGCAGACCAAGATCGAAGGCAAAGGAA 694501
Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGGACGCCC 6310
|||||||||| ||||| |||||||| | | | | || || | |||| || ||
Sbjct 694500 ACGGTATTAAGACCGTTGTTGTCAACCT--CAGCAGTGTAGCAGCCTCACTCGCCCGTCC 694443
Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370
| | ||||| | || || ||||| | ||||||||| ||||| || | |||| |
Sbjct 694442 CGGCTCCTACGTCATCAAGTACTTCGGTTTCGAACTTGGTGCTCAAACCAACATTGACCC 694383
Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430
||| |||| || | ||| | ||||| | || | || ||||||| ||||| ||
Sbjct 694382 CAAGGACGACCGTTGGATCATCAACGGTGCCCACGATGCTCCCAAGCTTCAGGATCACCT 694323
Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| ||||| || ||||||||| || ||| | ||| | ||||| ||||||||
Sbjct 694322 CGATGGCTTCATCAACAAGTTTGTTCTCTGTAAAAAGTGCAAGAACCCCGAGACCGA 694266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946028417497
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |