Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq267 82.4 7e-11 >seq267 Length=334782 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| |||||||| || | || || | || || ||||| || ||||||||||| Sbjct 143252 GTCAAGACCTTGACCGGCAAGACTATTACCCTTGAGGTCGAGTCATCCGACACTATCGA- 143194 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || || || ||||| || ||||| | | Sbjct 143193 -CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGA 143135 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 |||| |||||||| || | || || | ||| || | ||| ||||| || || || | Sbjct 143134 TTTTCGCCGGCAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGG 143075 Query 25189 AATCCACGCTACA 25201 |||| || || || Sbjct 143074 AATCAACCCTTCA 143062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326484299905