Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq272 170 4e-37
seq267 149 1e-30
seq237 138 2e-27
seq195 105 1e-17
>seq272
Length=530880
Score = 170 bits (188), Expect = 4e-37
Identities = 177/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||||||| || |||||||| || |||||||| || |||
Sbjct 332683 CCACCACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 332742
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || |||| || ||||| || ||
Sbjct 332743 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGG 332802
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| || |||||||| | || || ||
Sbjct 332803 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 332862
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466
|| | |||||| || || |||||||||||||||||||| |||||||| ||||
Sbjct 332863 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATGATGC 332914
>seq267
Length=334782
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | || | ||| || || ||||| || |||||||| || ||||||
Sbjct 143320 CCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 143379
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | || || || || || ||
Sbjct 143380 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGG 143439
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| ||| ||||| || || | ||| || ||
Sbjct 143440 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATAGTATCAGATGACTCAACC 143499
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || || || || || | |||||||||||| ||||||||
Sbjct 143500 TCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 143546
Score = 127 bits (140), Expect = 4e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || ||||| || | |||| ||| || || || || || |||||||| || |||||
Sbjct 143037 TCCACCACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGA 143096
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | || || || | |||||| |||||||| || | || || || || || ||
Sbjct 143097 GAGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGG 143156
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|| || |||||||| || ||||| | |||||| ||||| ||||| | ||| || ||
Sbjct 143157 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGAC 143216
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||| || || || || || | |||||||||||
Sbjct 143217 CTCAAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGA 143254
>seq237
Length=369279
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | |||||| |||||||| ||
Sbjct 287547 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 287488
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || || || || || ||||| |||||||| || ||||| | |||||| |||
Sbjct 287487 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 287428
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | ||| || || || | ||||||||| || ||||| |||||||| |||||
Sbjct 287427 ATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 287369
>seq195
Length=674302
Score = 105 bits (116), Expect = 1e-17
Identities = 657/1036 (63%), Gaps = 40/1036 (4%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | || ||| |||| || ||||| || || || |||||
Sbjct 559819 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCGAGATGGTTATCGATGTGAGCAAAAGCG 559760
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| | ||| || || || ||||| ||||| | | ||| | || ||
Sbjct 559759 TGCTGCTTAATGTAGGCGATACGGATGTTCTCATGCTGGTAGATCTCACCCTGGGTAGGG 559700
Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160
||| || |||||||| ||||| || |||| |||||| ||||| |||||||| ||
Sbjct 559699 ATAAGCTCACCAGTGAGGACGTTGATCAGAGTAGACTTGCCGGCACCGTTGGGGCCGATA 559640
Query 225161 ACGCCAATCCGGGATGACATTGCAACCTG---CGAGTTCACGTTG--CTGAAGATCTCAG 225215
||| |||| || || || | ||| ||| | || || ||| | | ||
Sbjct 559639 ACGGCAATACGAGAGCCCAGAGAGCACTGGAAGGAGATGTCGCTGATCTGGGGCTTGGAG 559580
Query 225216 G-GCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTCC 225268
| |||| |||| |||| || | |||| || ||||| | ||
Sbjct 559579 GTACCAG---GGTACTGGAAGGACATGTTGGTGGCACGGAG------AATGGCCTTGGCC 559529
Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328
|||| | | |||||| ||||| |||||||||||||| ||| | || | | ||
Sbjct 559528 TTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGCTGAACTCGATCTCGGACTCA 559469
Query 225329 TTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCC 225387
|| |||||||| || || |||| || || |||||||||| |||||| ||
Sbjct 559468 CCAAGCTCGTAGTAGGACTTGGCGGAGGGGTTGC-GGGCGACGAAAGCAGCCAGGTTACC 559410
Query 225388 GAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGT 225446
|| | ||||||||| || |||||| ||||| || ||| | ||| || ||
Sbjct 559409 CTTGTAACGCTTGAGCTTGA--ATC-GCTCGTAGTGAACGATGTGCTG-GCAGACGTTGT 559354
Query 225447 CAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGAGG 225505
||||||| || |||||||| || ||||||||||| | || | || | |||||||
Sbjct 559353 CAAGGAAACCGGAGTCGTGAGAGACAATGATGGAGGTGCAAG--CG--GAGTTCTTGAGG 559298
Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565
| | |||||| ||||| | || |||| ||||| ||||| || || || | |
Sbjct 559297 TACTCCTCGAGCCACTTAACGTTCTTCACATCCAAATGGTTGGTAGGCTCATCAAGCAAC 559238
Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625
|| || || | | | || || || || |||| |||||||| ||||| || ||
Sbjct 559237 AGAATATCGGGAGCCTCGAAGACAGCACGGCACAGAGCAAGCTTCATCTTCCAACCACCA 559178
Query 225626 GACAGGGAGCCGAT-TGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTC---CAGGAG 225681
|| |||| || ||| | | | | || || ||| ||| ||| |||| || |
Sbjct 559177 GAGAGGGCGCTGATCTCACCCTTAACCATTTGC-TCGGTAAAACCGAACTCGTTGAGCTG 559119
Query 225682 CGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTA 225741
| ||| || | || || | | || | |||| | | | | | | |
Sbjct 559118 CTTCTCGACATCAGCCTGGGTGGTGGTGACACCGGCCTCCTCAAGCTTCTTCATGGTCCA 559059
Query 225742 ATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCG 225801
||| |||||| || | ||| | ||| | |||||| || ||| | || |||
Sbjct 559058 GTCAATGGTGGTCATCTCAGTATCAGCGGAGTCCAAGTCGTGCTCGACGAAGACAGTCTT 558999
Query 225802 GAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGG 225860
|| || | || | |||||| ||||| | ||| | || || || || | ||||
Sbjct 558998 GACCTCGTCCTGC-TTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGG 558940
Query 225861 TACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGA 225920
| ||| || | ||||||||||| || |||||| | | || ||||||| ||
Sbjct 558939 TGGACTTTCCGGAACCGTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGA 558880
Query 225921 GGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACA 225980
|| | || ||| || || |||||| |||| |||||||| ||||| || | ||| |
Sbjct 558879 GGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAA 558820
Query 225981 GGTCCTCACCCTCCTC 225996
| ||||||||||||||
Sbjct 558819 GATCCTCACCCTCCTC 558804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921619093679640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |