Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq119 298 1e-75
seq180 297 4e-75
>seq119
Length=1526710
Score = 298 bits (330), Expect = 1e-75
Identities = 589/860 (68%), Gaps = 31/860 (4%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||| || |||||||| || ||
Sbjct 630500 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 630441
Query 42360 GCCAAGGACACGGCCGGCTGG-------GAGTCACTGTCTGAGAACGAAAAGTTTTTCCT 42412
||||||| || |||| || | ||| | ||| ||| | | ||| |
Sbjct 630440 TCCAAGGATCTCCACGACTGGAACAACCGATTGACT---TCAGA-CGAGCAATACTTCAT 630385
Query 42413 CAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCAC 42472
| |||| || || |||||||| ||||| |||||||| ||||||||||| || |
Sbjct 630384 CTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGA 630325
Query 42473 CAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGC 42532
| |||| ||||| ||| | ||||| || |||||||| || ||||||||
Sbjct 630324 GCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCAT 630265
Query 42533 CATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592
|| |||||| | ||||| || ||| || || || | || |||||| ||| ||
Sbjct 630264 GATGGAGAACATCCACTCCGAAACATACTCCCTCCTCATCGATACCTACATCAAGGACCC 630205
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||||| || ||||| ||| | || || || || |||||| ||||||||
Sbjct 630204 TGCCCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 630145
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||| ||||| || |||||| || | || | || || | || | || || ||
Sbjct 630144 GGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGC 630085
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
||| | ||||| ||||| ||||||||| || ||||| || |||||||||||||||||
Sbjct 630084 TTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAA 630025
Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || || || ||||| || || | ||| || ||||| ||||| | || ||||
Sbjct 630024 GAAGCGTGGCCTC-ATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 629966
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890
| || || | ||||||||||| ||||| ||| |||||| ||| || ||| |
Sbjct 629965 GTCTTCACACCGACTTTGCCTGTCTCCTCCACTC---TCACCTCAAGGGACGTGCCAGC- 629910
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
|| || | ||| || ||| ||||| || ||||| || ||| ||||||| || ||
Sbjct 629909 AAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACT 629850
Query 42951 CAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
|| | || ||| ||| ||||| ||||||||||| | |||||||| |||||||| |
Sbjct 629849 GAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCGA 629791
Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC----AGCCGCCTCTACAACACGC 43065
| |||||| || | |||||| | | |||| || | | ||||| |
Sbjct 629790 ATTCGTCGCTGATCGTCTCCT------CGTTGCTCTCGNNGAGAAG-GTGTACAAGTCCA 629738
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| ||| |||||||| |||||||||||||| | | ||||| |||||||| |||||||
Sbjct 629737 CCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAAACCAACTTCTTCGAGA 629678
Query 43126 AGCGCGTCGCCGACTACCAG 43145
||||||| || |||||||||
Sbjct 629677 AGCGCGTTGCTGACTACCAG 629658
>seq180
Length=606450
Score = 297 bits (328), Expect = 4e-75
Identities = 891/1367 (65%), Gaps = 59/1367 (4%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || ||||| ||||||| |||| | || ||
Sbjct 291226 GTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGG 291167
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | || || ||||||| || ||||||| || || || || ||||| || | ||
Sbjct 291166 CTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTACTGGCGGTAGGCATAGGAGCAAC 291107
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
||||||||||| | | ||||| ||| || || ||| | |||||||||
Sbjct 291106 GAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCA 291047
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | ||||| | | | || ||||||||| ||||| || | ||||
Sbjct 291046 AAGGTC--AGAGGGCTTGACATT-------CCACATGTCGAACTGGAGAATACCCTCAGA 290996
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388
| | ||| ||||| | |||| | ||||||||| || || || || | |||| |
Sbjct 290995 GGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAGACGT 290936
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448
|| ||||| |||| |||||||||||||||||| |||||||| || || ||||
Sbjct 290935 AGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCT--- 290880
Query 244449 CGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503
|||| || |||| |||| | | |||| | || || || || ||||| ||
Sbjct 290879 --CAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACC 290822
Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563
| || ||||||| ||| ||| ||||| | || || | || ||||| |||
Sbjct 290821 AAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTT 290762
Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623
| ||||||| | |||||| | |||||| | | | ||| ||| |||| ||
Sbjct 290761 GACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTT 290702
Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGC--- 244680
|||||||| | | | ||| || | || ||| || ||||||
Sbjct 290701 GAAGTCGTA---GCAAGCATCTTCATAGTTGATGA--------AA------GAGGGCAGA 290659
Query 244681 GAC--GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCG 244738
||| | ||| |||||||| || || ||||| || | | | ||| | | |||||
Sbjct 290658 GACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCA 290599
Query 244739 GTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAG 244798
||||| ||||| || |||||| || |||| || || || |||| ||||||
Sbjct 290598 GTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAG 290539
Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTC 244858
||||||||||||||||| || |||||||| |||||| | || | | || |
Sbjct 290538 TGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTAC 290479
Query 244859 CAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTAC 244918
|| || | | |||||||| | | ||||| |||| |||||| |||||| ||||
Sbjct 290478 CAAAGCTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTAC 290419
Query 244919 AGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATG 244978
|| ||||| || ||| || || || | ||||| ||||| |||||||||
Sbjct 290418 AGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATG 290359
Query 244979 AGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCC 245038
||| |||| |||||| || ||| | || |||||| || || |||||||| || ||
Sbjct 290358 AGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCT 290299
Query 245039 TGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAA 245097
||| ||||| | | | ||| ||| || ||| ||||| | || || | ||
Sbjct 290298 AAGAACAGGTCACGAGCGCGGACCTCCTCCTTACC-GTGATTCTTTCGGAGATCAAGGAA 290240
Query 245098 GTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTT 245157
|| ||||||||| ||||||| ||||| | ||||| |||| ||| || || ||||||||
Sbjct 290239 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 290180
Query 245158 GCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTA 245213
|| ||||||| || | | ||||| |||||| | ||||| | || || |
Sbjct 290179 ACCACCCTGGT----CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 290124
Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGC 245270
| ||||| || || ||||| || |||||| | ||| || | | || ||| |
Sbjct 290123 TACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGG 290064
Query 245271 TGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGT 245330
| | || ||| | || || || |||||| || | ||| || |||||| ||| |
Sbjct 290063 CGTT---CAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTAT 290007
Query 245331 CTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGG 245390
| || || || ||||||||| |||||| | | || ||||| || || ||||| |
Sbjct 290006 CGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAG 289947
Query 245391 GCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
||| || | | | |||||| | ||||||||| || || || |||
Sbjct 289946 GCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAG 289900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944335812183120
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