Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq119 100 6e-16
seq195 91.5 3e-13
>seq119
Length=1526710
Score = 100 bits (110), Expect = 6e-16
Identities = 117/158 (74%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
||||||||||| | |||||| ||||||||||||||||| || || || | || |
Sbjct 629825 GGCATGAACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTT 629766
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| || | ||||| |||||||| |||| ||||| || | ||| |||||| |||
Sbjct 629765 GCTCTCGNN---GAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATC 629709
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| ||| || ||||| ||||||||||| ||||| ||
Sbjct 629708 TCCCTTGGCGGCAAAACCAACTTCTTCGAGAAGCGCGT 629671
>seq195
Length=674302
Score = 91.5 bits (100), Expect = 3e-13
Identities = 170/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164
|||||||| | | ||| | || ||| | ||| | ||||| || ||| | |||| |
Sbjct 559059 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCCAAGTCGTGCTCGACGAAGACAGTCT 559000
Query 334165 TCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAG 334224
| | | ||| |||||| || || | ||| |||| || |||||||| || |
Sbjct 558999 TGACCTCGTCCTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGG 558940
Query 334225 TTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGA 334284
| || || || | ||||| || ||||| |||||||| || | |||||||| ||| ||
Sbjct 558939 TGGACTTTCCGGAACCGTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGA 558880
Query 334285 ACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACA 334344
| || | ||| |||||||| || |||| || || ||||| || ||| | || |
Sbjct 558879 GGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAA 558820
Query 334345 GATCCTCACC 334354
||||||||||
Sbjct 558819 GATCCTCACC 558810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102875944503450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |