Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq119 100 6e-16 seq195 91.5 3e-13 >seq119 Length=1526710 Score = 100 bits (110), Expect = 6e-16 Identities = 117/158 (74%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | |||||| ||||||||||||||||| || || || | || | Sbjct 629825 GGCATGAACTCCAACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTCGTT 629766 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || | ||||| |||||||| |||| ||||| || | ||| |||||| ||| Sbjct 629765 GCTCTCGNN---GAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATC 629709 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || ||| || ||||| ||||||||||| ||||| || Sbjct 629708 TCCCTTGGCGGCAAAACCAACTTCTTCGAGAAGCGCGT 629671 >seq195 Length=674302 Score = 91.5 bits (100), Expect = 3e-13 Identities = 170/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 334105 AGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTT 334164 |||||||| | | ||| | || ||| | ||| | ||||| || ||| | |||| | Sbjct 559059 AGTCAATGGTGGTCATCTCAGTATCAGCGGAGTCCAAGTCGTGCTCGACGAAGACAGTCT 559000 Query 334165 TCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAG 334224 | | | ||| |||||| || || | ||| |||| || |||||||| || | Sbjct 558999 TGACCTCGTCCTGCTTGGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGG 558940 Query 334225 TTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGA 334284 | || || || | ||||| || ||||| |||||||| || | |||||||| ||| || Sbjct 558939 TGGACTTTCCGGAACCGTTGGGACCACAAAGACCGTAACGCTGACCACGCTTGAGACGGA 558880 Query 334285 ACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACA 334344 | || | ||| |||||||| || |||| || || ||||| || ||| | || | Sbjct 558879 GGTGAGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAA 558820 Query 334345 GATCCTCACC 334354 |||||||||| Sbjct 558819 GATCCTCACC 558810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875944503450