Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq272 102 9e-17
>seq272
Length=530880
Score = 102 bits (112), Expect = 9e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || || ||||| || ||| || || | || ||
Sbjct 332701 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 332760
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||||||||| || || |||||||||||||| | || | | |||||||||| |
Sbjct 332761 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 332820
Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|| || |||| ||| | | | |||||| || ||||| || | ||||| || ||
Sbjct 332821 ATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 332879
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| || || || |||||
Sbjct 332880 CCCCGTGAGGGTCTTGACGAAAATCTGCAT 332909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210851224080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |