Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq180 178 1e-39
>seq180
Length=606450
Score = 178 bits (196), Expect = 1e-39
Identities = 318/462 (69%), Gaps = 2/462 (0%)
Strand=Plus/Plus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATGACGAACAAGGC 93965
|||||||| || || || ||| ||| | || || || ||||| | ||| | ||||
Sbjct 289925 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGAT-ATGAAGGA 289983
Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025
||| ||| || || | ||| | ||||||| ||||| | || || || ||
Sbjct 289984 GGACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGC 290043
Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085
|| || || || | | | |||| | ||||||| || || |||||| ||||||
Sbjct 290044 TGGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTAC 290103
Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145
|||||| || |||||||| |||| || ||||| || || ||||||||| | || || ||
Sbjct 290104 CAATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTA 290163
Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
||| |||||||||||| | | | ||| | ||||| |||| || ||||| |||||
Sbjct 290164 CGTTGACCAGGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCA 290223
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
||| ||||| | ||| | || || |||||||| ||||| || || || | ||
Sbjct 290224 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGCGC 290283
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| ||||| |||| ||||| ||| | || || ||||| ||||| || ||||||| |||
Sbjct 290284 TCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAA 290343
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367
| || |||| ||| | || || || ||||| || || ||
Sbjct 290344 CGGCGAATGGACTCTCATGTGCCCTAACGAATGCCCTGGCCT 290385
Score = 125 bits (138), Expect = 7e-24
Identities = 260/384 (68%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053
|||| ||| | ||||||||| | ||| ||| |||||||| | || | |||||||||
Sbjct 291000 AGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC 291059
Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113
| || || | ||||| | | |||||| | ||| ||||| || || || ||||
Sbjct 291060 CCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGC 291119
Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173
| || ||| || ||||||| |||||||||||||| | || || || | ||||||||
Sbjct 291120 CTACCGCCAGTACTTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTTACACCTCCA 291179
Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232
|| | ||| | | || || || || || || |||| || ||||| || || |
Sbjct 291180 ACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCA 291239
Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288
|| | || || | ||||| | ||| || | ||||||| | ||||
Sbjct 291240 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 291295
Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348
| ||||| || ||||||||||||| | || || | || |||||||| || |||||
Sbjct 291296 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCTCTGTACAA 291354
Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372
||| ||||||||||| | |||||
Sbjct 291355 GACTGTGTGGGAGATTTCTCAGCG 291378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721425180520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |