Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq180 122 1e-22
>seq180
Length=606450
Score = 122 bits (134), Expect = 1e-22
Identities = 1072/1709 (63%), Gaps = 67/1709 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|||| || |||||||||||||| || |||||||| || |||||||| || | |||
Sbjct 291540 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 291481
Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668
|| || | |||| | || || | |||| | ||| | | || || |||
Sbjct 291480 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 291421
Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725
|| |||||| || || || || ||||| | |||| ||| || || |||
Sbjct 291420 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 291364
Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785
|||||||| |||| || ||| || || | ||||| | ||| || ||||||||
Sbjct 291363 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 291304
Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842
|| | | || ||| || | | ||||||| | | ||||| ||||| || |
Sbjct 291303 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 291247
Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898
||||||| | | ||| | |||||||| ||||| || || ||| || |
Sbjct 291246 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 291191
Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958
| |||||||||| ||||| ||||||||||| || ||||| || | || || | ||
Sbjct 291190 TTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGT 291131
Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018
||| || ||||| || || | ||| || |||||||||| ||| | | |
Sbjct 291130 ACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 291071
Query 116019 TTCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076
|| ||||| ||||||| | || | || | || | | |||||| || |||
Sbjct 291070 CTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAG--AGGGCTTGACATTCCACATGTCGAAC 291013
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
||||| ||||| | || || || || |||| || || || || || || |||
Sbjct 291012 TGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTA 290953
Query 116137 GCCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195
|| | || | || || ||||| ||||| || || ||||| || || | ||
Sbjct 290952 GCGAGTTGCACAG-ACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 290894
Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAG 116255
|| | ||||| || ||||| | | ||| || || |||| || ||
Sbjct 290893 CAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAG 290834
Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 116315
|||||| ||||| || ||||| || || || | ||| || || ||||| | ||
Sbjct 290833 ACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGAC 290774
Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTT-TGTGAT 116372
|| || || ||||| | | | || | | ||| |||||| ||| ||||
Sbjct 290773 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAA---TTGCGGACAACGACTTGAGTGAC 290717
Query 116373 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAG 116429
|| || ||||| | | | || | || || |||||| |||| | || ||
Sbjct 290716 CTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAG 290660
Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489
| | || || || || || |||| | |||||| | ||| || || || ||
Sbjct 290659 AGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTC 290600
Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTA 116547
|| |||| || || || ||||| || | ||||||||| || ||| ||| | ||
Sbjct 290599 AGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATTG 290542
Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607
|| ||||||||||||||| | || | || ||||| || |||| || ||||| ||
Sbjct 290541 CAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCG 290482
Query 116608 TTCCATA-CATCGGCGGC-TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTG 116665
| ||| | | || | | | || | | | ||| | ||||| ||||||||||
Sbjct 290481 TACCAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCTCGTACTTTT 290424
Query 116666 TGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTT-ATCTGG 116723
||| || |||||||| || ||| || ||| || | || || || || || | ||
Sbjct 290423 CGTACAGAGCCTCAAATTCGTCA-CCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGG 290366
Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783
|| | ||||| ||||| || ||| || ||||||||||| || || ||||||||
Sbjct 290365 GCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCA 290306
Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843
|| || |||| || || ||| ||| | || || | || ||||| || | ||
Sbjct 290305 AAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATC 290246
Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CC 116897
| || || | || || |||||||| || || ||||| | |||| | || |
Sbjct 290245 AAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCG 290186
Query 116898 CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957
|||| |||| |||||| || || | || || ||| || || || ||||| ||
Sbjct 290185 CTTG---TTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 290129
Query 116958 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACA 117015
|| |||||| | || ||||| || || ||| || ||| | |||| | ||
Sbjct 290128 AACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCC--AGTGGCACGGATT 290071
Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075
|||| || || |||||||| || ||| ||| || || || || | ||||
Sbjct 290070 CGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGG 290011
Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135
| ||||||| ||||| || ||| |||| | | | |||||||| || |
Sbjct 290010 GTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGC 289951
Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG- 117194
|| ||| ||| ||||| |||||||| | || || | || || ||| | | ||||
Sbjct 289950 TGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGC 289893
Query 117195 -GGACATCTTATCGTAGGTCTCCAAGACA 117222
||||| | ||| ||||||||||||
Sbjct 289892 TTGACATGAGGTTGTATGTCTCCAAGACA 289864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504999042920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |