Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq237 120 3e-22 seq267 116 4e-21 seq272 102 9e-17 >seq237 Length=369279 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| || || || | || |||||||||||||||||||| | Sbjct 287549 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 287490 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| |||||||| || | || | || |||||||||| |||||| ||||| | Sbjct 287489 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 287430 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | |||||||| ||||||||||| || || || | Sbjct 287429 CGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 287370 Query 46584 A 46584 | Sbjct 287369 A 287369 >seq267 Length=334782 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || |||||||||||||||||||| Sbjct 143355 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 143414 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| |||||||| || | || | || |||||||||| |||||| ||| | ||| Sbjct 143415 AATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCA-CGT 143473 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || || | || || || ||||| |||| || || | Sbjct 143474 TGTCGATAGTATCAGATGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGA 143533 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 143534 CGAAGATCTGCAT 143546 Score = 107 bits (118), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || || || |||| |||||||||||||||||||| Sbjct 143074 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCCTCGAGCTGCTTGCCGGCGAAA 143133 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | || | | |||||||||| |||||| ||||| | Sbjct 143134 ATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTG 143193 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | |||||| || || || || | || || || ||||| |||| Sbjct 143194 TCGATAGTGTCGGATGACTCGACCTCAAGGGTAATAGTCTTGCCGGTCA 143242 >seq272 Length=530880 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || ||||| | || ||||||||||| || || || Sbjct 332718 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 332777 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 332778 GATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 332836 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | ||||| || || ||||| || || || | Sbjct 332837 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 332896 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 332897 CGAAAATCTGCAT 332909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236372207240