Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq180 208 9e-49 seq114 158 1e-33 seq119 91.5 2e-13 >seq180 Length=606450 Score = 208 bits (230), Expect = 9e-49 Identities = 1014/1593 (64%), Gaps = 59/1593 (4%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||||||||| ||||| |||||| ||||| ||||| | | | | | | | Sbjct 291432 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAA----CCTGTCG 291377 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||| ||||| ||||||||||||| | |||||| || | || |||| ||| Sbjct 291376 CTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGAT 291317 Query 109623 GTTTTGAATAGAGCC---ACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAG 109679 ||| || ||||| || | |||| | | || | | |||||| | | ||||| || Sbjct 291316 GTTCTGGATAGAACCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAG 291260 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 ||| | | ||||| | | ||| |||||| || || || |||||||| Sbjct 291259 ACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAG 291200 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || |||||||||| | ||||| || || || || || |||||||| || || Sbjct 291199 GACTCGGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAAT 291140 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 || | ||| || || ||||| ||||| | ||| |||||||| |||| ||| | || Sbjct 291139 CTGCGAAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGT 291080 Query 109860 CTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 ||| || ||| || | | ||||| || || | || | || ||| Sbjct 291079 CTTGACATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG------GGCTTGACATT 291026 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 |||||| || || || | |||||||| ||||| || |||||||| | ||| | Sbjct 291025 CCACATGTCGAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGG 290966 Query 109980 CCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 || || ||| || | | | || | || || || || || || || ||||| Sbjct 290965 ACCTTCCTCCTTAGCGAGTTGCACAGACGTAGTA---AGGGCAGCGTGGTAGATGGTCTC 290909 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAA 110092 || || || |||| |||| ||| | | || ||||| | || ||| Sbjct 290908 GAAGATTTGCTTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAG 290849 Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152 ||| |||| || ||||| || ||||| ||||||||||| || || |||||| Sbjct 290848 GAAGG----CATCAGCAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGC 290793 Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 | ||||| || || ||||| |||| |||||||| | || | ||| | Sbjct 290792 TGTTACGAGCCTCTTGGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCG-G 290734 Query 110213 TCACAGTCTTC-GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TT 110270 || | ||| |||| || || || || | | | ||| | | | ||| | || || Sbjct 290733 ACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTA-GCAAGCATCTTCATAGTT 290675 Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 || | ||| |||| | || ||||| ||||| |||| ||| || | || Sbjct 290674 GATGAAAGAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCA 290615 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 |||||| | || || || |||| |||||| || ||| ||| | |||||| || || Sbjct 290614 GTATTCAATGATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT 290555 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 ||| ||||| |||||| ||||||||| | ||| | || || || ||||| | Sbjct 290554 ACTCTTGCGATTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGC 290495 Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGG-ACAGTTGCGTTAGCGAGACCTTCC 110508 || |||||||| | ||| | | || | | | | | | ||||| | | ||| || Sbjct 290494 CTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCT 290437 Query 110509 TCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTC 110568 ||||||||| ||||| |||||||||| | ||||| |||| ||| || Sbjct 290436 CTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG- 290378 Query 110569 GCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || || | ||| | ||| | || ||| || | ||||||||| || Sbjct 290377 GCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAG 290318 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||||| ||||| | || |||| |||||||| || |||| || | ||| || || Sbjct 290317 ATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATT 290258 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 || || || | || || | || || | ||||||||| || || |||| |||| Sbjct 290257 CTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAA 290198 Query 110748 GGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGAC 110801 || || | | || ||| |||||| ||| || || || ||| ||||| || Sbjct 290197 GGCACC---AGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACAC 290141 Query 110802 CCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATT 110861 | ||||| |||| || || | ||| |||||| ||||| || || | | Sbjct 290140 ACGCAGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGT 290081 Query 110862 GGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA 110921 |||||| || |||| | || ||||||||||| ||| ||| ||| ||||| Sbjct 290080 GGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACA 290021 Query 110922 C-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 ||| |||| ||| | || ||||||||||| || |||| | ||| || |||| Sbjct 290020 AGTCT-TGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGC 289962 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 | || || | |||||| | || || || || ||||| | || || | |||||| ||| Sbjct 289961 ATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA 289902 Query 111041 ACAGACCTTG--GGACATCTTGTTGTATGTGTC 111071 ||| |||| ||||| ||||||||| || Sbjct 289901 --AGAACTTGCTTGACATGAGGTTGTATGTCTC 289871 >seq114 Length=600994 Score = 158 bits (174), Expect = 1e-33 Identities = 320/464 (69%), Gaps = 22/464 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | ||||| | || || ||||| | ||||| ||| | Sbjct 327562 CGATCGAATCGTCCAGGTCGCATCAGAGCCTTGTCCAGCATATCCGCTCGGTTAGTACCA 327621 Query 11563 GCAATGACTACAATGCCAGT-CTC-ATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 |||| ||| || | | || | | | ||| ||| ||||||||||| || |||| ||||| Sbjct 327622 GCAAGGACGACCA--CTTGTTCACGAGTGTTGAAGCCGTCCATTTCCGTAAGAATCTGGT 327679 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTTAC--- 11677 | | |||| |||||| || ||||| | | ||| | ||||| | ||| | | Sbjct 327680 TCAGCGTCGCTTCACGTTCGTCGTTACCGCCAAAACC-CTTGCCGCTCTCTTGTCGCGCG 327738 Query 11678 CGACA----GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 |||| || |||||||||||||| || | ||| || || ||| ||| ||| Sbjct 327739 CGACCAATGGCATCAATCTCATCGATAAAGATGATGCAAGGGGCGTTCTTACGGCCCTCG 327798 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || ||||||||| | ||||||||| || |||||||||||||| | | Sbjct 327799 GCGAACAGATCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAA 327858 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || || ||||| |||||| || ||||||||| || |||| || || | | Sbjct 327859 CCGC-TCACGCTGAA-GAAGGGTACTCCAGACTCACCCGCCGTGGCCTTGGCAAGCAACG 327916 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---AC 11908 ||||||| ||||| || | ||||| | || || || || |||||||||||||| Sbjct 327917 TCTTACCAGTACCGGGGGGTCCAGCCAAAATAGCACCTCGTGGGATCTTGGCACCCAGCT 327976 Query 11909 TTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || |||| | |||||||| ||| | |||| ||||| |||| Sbjct 327977 TTTCAAACT---TCTCAGGCTGCTTCAAGAAGCTCACAAACTCC 328017 >seq119 Length=1526710 Score = 91.5 bits (100), Expect = 2e-13 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || ||||| ||||| |||||||| ||| |||| || || Sbjct 629946 GGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACC 630005 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| || | ||||| ||||| ||||||| | ||| || |||||||| Sbjct 630006 AGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGAT 630065 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG 119661 ||||| || || ||||| | ||||||| ||| |||||| ||| Sbjct 630066 ACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGC-AAAGGTAGAG 630111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973887048600