Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq180 196 6e-45 seq119 93.3 5e-14 >seq180 Length=606450 Score = 196 bits (216), Expect = 6e-45 Identities = 1097/1736 (63%), Gaps = 45/1736 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || |||||||| || | ||||| | | ||||| | | Sbjct 291531 CGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 291472 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || || | |||| || || | | ||| ||| ||||||||| Sbjct 291471 ATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAATGAAG 291412 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766 |||||| | || ||||| | | || ||| || || |||||||| || Sbjct 291411 GCACCACGGTCAGCAGCCATCTGCA---CAACCTGTCGCTGAGAAATCTCCCACACAGTC 291355 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCC---CC 105823 ||| ||| |||||| || | ||||| | | ||| || || || ||||| | Sbjct 291354 TTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCGTTATCA 291295 Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || ||| || | | ||||||| | | |||||||||||| || | ||||| ||| Sbjct 291294 GCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTG 291238 Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943 | || |||||||| | ||||| || || ||| || | | |||||||| Sbjct 291237 AGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTG 291178 Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003 | ||||| || ||||||||||| || || || | || || | || ||| || ||| Sbjct 291177 GAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTACTGGCGGTAGGC 291118 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || || || | | |||||||| || | ||| | ||||| || ||| Sbjct 291117 ATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGT 291058 Query 106064 TCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 |||||||| | | | || || || || |||| |||| || || || || | || | Sbjct 291057 TCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTCGAACTGGAGAATACCCT 291000 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAG 106180 || | || || |||| || || |||| ||||| | | ||| | || ||||| Sbjct 290999 CAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAG 290940 Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240 || |||| ||||| || ||||| || ||||| | |||| ||| || Sbjct 290939 A-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCC 290881 Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300 ||| || ||||| | |||| || || |||| || |||||||| ||||| Sbjct 290880 TCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACCA 290821 Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360 | |||||| |||| ||| ||||| || || || || | || || || || Sbjct 290820 AGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTTG 290761 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 ||| |||| ||| | ||| | ||| | | |||| || || || || | Sbjct 290760 ACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTG 290701 Query 106421 TAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | || || ||||||| ||| | || || | | || || | Sbjct 290700 AAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCAGAGACAAGGAGGCAAGG 290644 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||||||||| |||||| | ||| || | || || || |||| |||||| Sbjct 290643 TTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGGAG 290584 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||||||||||||||| ||||| ||||||||||||| Sbjct 290583 CTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGCAGTGATCCTTGTAGAGC 290524 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656 ||| | || | || ||||| ||||| | || ||||| || | ||| | | || | | | Sbjct 290523 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCC 290464 Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | || | | ||| ||| | ||||| |||||||||| ||| || || ||||| Sbjct 290463 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAAT 290407 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773 || ||||| ||| | || || || || || || || || | |||| ||||| Sbjct 290406 TCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACATGAGAGTCCATTC 290348 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || ||| || |||||||||||||| || || ||||| || | | | || || || Sbjct 290347 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 290288 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | | || |||| || | ||| || || ||| | ||||||||||| | || || Sbjct 290287 ACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACGTC 290228 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTG 106947 ||||||||||||||||| |||| |||| || || ||| | ||| | || Sbjct 290227 GGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTA---CCACCCTG 290171 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 | || || || || ||| ||| || || || ||||| |||| ||||| | || Sbjct 290170 GTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGT 290111 Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 |||||| || || || ||| | |||| | | ||| || || ||||| Sbjct 290110 ACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCCAAT 290051 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 ||| |||||| ||| || || ||||| | | || || | |||||||| | || Sbjct 290050 ACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCATCAAT 289991 Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187 ||||||||| | | | ||||||||| || | ||| || ||| ||||| || Sbjct 289990 GCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGC 289931 Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245 ||||| | || || |||| ||| ||| | | |||| ||||| || ||||||| Sbjct 289930 GTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACATGAGGTTGTATGTC 289873 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 ||||||||| ||||| || || || ||| || | || || ||||| | ||| Sbjct 289872 TCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGATCAT 289817 >seq119 Length=1526710 Score = 93.3 bits (102), Expect = 5e-14 Identities = 299/457 (65%), Gaps = 21/457 (5%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| ||||||||||| || || ||||| ||||| ||||| Sbjct 629662 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTTTTGCCGCCAAGGGAGATGTTCTCCATG 629721 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGGTGGCACCCCAACTTGTTTGAGGAGA 117102 ||||| || || || | | || | | | | |||| ||||||| Sbjct 629722 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCNNCGAGAGCAAC------GAGGAGA 629775 Query 117103 CGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTA 117162 ||||| | || | || ||||||| ||| | |||||||| |||| || | Sbjct 629776 CGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCA 629835 Query 117163 CATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 || ||||| || || |||| ||| | | |||||| ||| || || | | ||| Sbjct 629836 CAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAATGT 629893 Query 117221 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | ||||| | | | ||| ||| || | || | || ||| || ||||| Sbjct 629894 CCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCAA 629950 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| ||||||||||| || ||||| || || || || |||| || || |||| Sbjct 629951 AGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAGGCA 630010 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396 |||| || |||||||| | ||| | || | ||| || | ||| ||||||||||||| Sbjct 630011 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACCC 630069 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || ||||| |||| ||| |||| || |||| Sbjct 630070 TCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGG 630106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978683443880