Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq180 331 2e-85
seq119 176 8e-39
>seq180
Length=606450
Score = 331 bits (366), Expect = 2e-85
Identities = 1163/1773 (66%), Gaps = 116/1773 (7%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | || |||||||||||| || || || ||||||||||| |||||
Sbjct 291567 ACGGTGAACTGGATAGGGGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTG 291508
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | | ||
Sbjct 291507 AGACCGAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCCATGGTAG- 291456
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
|||| | || || || | ||| || |||||| ||| || ||||| | |
Sbjct 291455 --GGTCCT--TCATG-------TGAATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 291407
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| |||||| ||||| | | | | || ||| || | ||||||||| |||||| | |
Sbjct 291406 ACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAG 291347
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848
| |||| || | |||| | |||||||||||| | ||| || || ||| |||
Sbjct 291346 AGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAACC---GT-TAT---CAG 291294
Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900
| || | ||| ||| | ||| ||| || ||| || | || |||||
Sbjct 291293 CAATG-ATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGA 291235
Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960
|| |||||||| | |||||| || || | || || | | ||||| | ||| ||
Sbjct 291234 AGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAG 291175
Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020
||||| ||||| | || |||||||| || |||||||| | ||| ||||| || |||||
Sbjct 291174 GTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAAGTACTGGCGGTAGGCATA 291115
Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTG---CTCGCCGATGAGGCGC-CGAAGCTC 213076
||||| || || |||||||| | | ||||| || | | | | | || ||
Sbjct 291114 GGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGAC----ATCCTCTCGGAGGGG 291059
Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136
| |||||||||| | |||| | ||| || ||||||||||| ||||| |
Sbjct 291058 TTCCCAGTCCCAAAGGTCAGAGGG---------CTTGACATTCCACATGTCGAACTGGAG 291008
Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192
|| || |||| | ||| ||||| | | | ||||||||| || | |||||| |
Sbjct 291007 AATACC----CTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTCCTTAG 290952
Query 213193 CCAGCTCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251
| || | ||| |||| |||||||||| ||||||||| || || || | | ||||
Sbjct 290951 CGAGTT-GCACAGACGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 290893
Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311
|||| ||||| || ||| |||||||| | | |||| ||||||| ||
Sbjct 290892 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGA 290833
Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370
|| || || || | || ||||||| ||| | || ||| || |||| ||| | |
Sbjct 290832 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGC-CTCTTGGAC 290774
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
||||| |||| ||||||||||||||| | |||||| | |||| ||||| |
Sbjct 290773 AGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTC 290714
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACA-------AACTCAGGCA 213483
| ||| | || |||| |||||| | || | || | || ||||
Sbjct 290713 GTGCAGCTTCT------TGAAGTCGTAGCAAGCATCTT-CATAGTTGATGAAAGAGGGCA 290661
Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543
| | | | ||| ||||||||||| || ||||| | || | | ||| || |||||||
Sbjct 290660 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 290601
Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCGTTG 213602
| |||||||||||| || ||||||||| || ||||||| ||||| ||| ||||| |
Sbjct 290600 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTT--ACTCTTGCGATT 290543
Query 213603 GCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTG 213661
|||| |||||||||||||||| | ||| ||||||||| ||||| | | || ||
Sbjct 290542 GCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGC 290483
Query 213662 GCTCCAGAGGTACCTGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTAC 213719
| ||| || | | ||||||| || || ||| | | | | | |||||||
Sbjct 290482 GTACCAAAGCTTCTGAGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTAC 290428
Query 213720 TGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATG 213777
| |||||| || | | ||||||| || || | || ||| | || |||| ||
Sbjct 290427 TTTTCGTACAGAGCCTCAAATTCGTCACCGTAG---CAGT-CAG-CAAGGCCAGGGCATT 290373
Query 213778 CG---GGACACATGAGGCTCCAGTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCC 213833
|| || |||||||| |||| || |||| ||||| ||| | || |||||| || ||
Sbjct 290372 CGTTAGGGCACATGAGAGTCCATTCGCCGT-TTCTCTCGACACGCTTCATGAAAAGATCA 290314
Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTG 213893
|||| ||| || || ||||||||| | | | ||| ||| || || ||
Sbjct 290313 GGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTT 290254
Query 213894 CGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCG 213953
|| ||||| || || || |||| ||| |||||||| ||||| | ||||||||| |||||
Sbjct 290253 CGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCA 290194
Query 213954 CCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGG 214010
|| || | |||| || |||||||| || | || ||||||| | |||||
Sbjct 290193 CCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGC 290134
Query 214011 ACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTC 214070
| ||| || | |||||||| || ||||| || || || || ||||| | ||| |
Sbjct 290133 ATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGG 290074
Query 214071 A--GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128
| | || | | | || || || ||||| || |||||| |||||||| || |
Sbjct 290073 ATTCGGTGGGCGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCT 290016
Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTC 214187
| | || || ||| || | |||||||| || | | ||| ||| ||||||
Sbjct 290015 TGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGAT 289957
Query 214188 GAGAGCTGGGGC-CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAA 214246
|| ||||| ||| |||| | || | |||||| | |||||||| ||||| | | ||
Sbjct 289956 GAAAGCTGAGGCTGTGGA-GTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAA 289898
Query 214247 CTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279
|||| | || | ||| |||| ||||||| |||
Sbjct 289897 CTTGCTTGACATGAGGTTGTATGTCTCCAAGAC 289865
>seq119
Length=1526710
Score = 176 bits (194), Expect = 8e-39
Identities = 482/732 (66%), Gaps = 24/732 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| | || | ||||| |||||||| || || || | | |||||||||||
Sbjct 629658 CTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTTTTGCCGCCAAGGGAGATGTTCTC 629717
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||| ||||||| | || |||||| || | | | || ||
Sbjct 629718 CATGAAGTCGAAAGGGTTGGTGGACTTGTACACCT---TCTCNNCGAGAGCAACGAGGAG 629774
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG- 48017
|||| |||||| | |||||||| | ||||||| || ||||||||| | ||||
Sbjct 629775 ACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGC 629834
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||| ||| | ||||| || |||||||||| ||| || ||||| || | ||| |
Sbjct 629835 ACAAGGG-AGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTGATAATGT 629893
Query 48078 GCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAGAGCAT 48129
|| || | |||| |||| || ||| || | ||| | | ||| |
Sbjct 629894 CCT------GGATCATCTG----TTTGCTG-GCACGTCCCTTGAGGTGAGAGTGGAGGAG 629942
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||||||||||| |||| | || || || || |||||| |||| || |||| ||
Sbjct 629943 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 630002
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
||||||||||| || | || ||||||||||| || | || || | || ||||||
Sbjct 630003 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 630062
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
||| ||||| || || || || || || | || | || | || |||||| ||
Sbjct 630063 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 630122
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369
|||||| | ||||| || |||||||| |||||| || || || || | |||
Sbjct 630123 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 630182
Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429
|||||| | | | || | | |||| | |||||| || || | ||| |
Sbjct 630183 GAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTATGT 630242
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
|| ||||| | ||||| || ||||||||| || |||||| | ||||| |
Sbjct 630243 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGAT 630302
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
||| || || | ||||| ||| | |||||||||||||| || || || || |||||
Sbjct 630303 CTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAGC 630362
Query 48550 AAAGAAGGCAAG 48561
||||| |||||
Sbjct 630363 GAAGAAAGCAAG 630374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931529458126080
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