Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq119 167 4e-36 seq180 156 8e-33 >seq119 Length=1526710 Score = 167 bits (184), Expect = 4e-36 Identities = 384/570 (67%), Gaps = 9/570 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| || || ||||| ||||| Sbjct 630500 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 630441 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAA---AGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || | || | ||||||||| | || || Sbjct 630440 TCCAAGGATCTCCACGACTGGAACAACCGATTGACTTCAGACGAGCAATACTTCATCTCC 630381 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| || || || || || |||||||| ||| || Sbjct 630380 CACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGAGCGA 630321 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||| ||||||||||| || Sbjct 630320 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCATGATG 630261 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772 || || | ||||| || || || || | ||| || ||||| | ||| || Sbjct 630260 GAGAACATCCACTCCGAAACATACTCCCTCCTCATCGAT-ACCTACATCAAGGACCCTGC 630202 Query 25773 CGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCG 25830 | || | | || || || ||| | || ||| || || ||||| | ||||||| Sbjct 630201 CCAGCGTACATAC-CTCTTCAACGCCGTTGA-CACTATTCCTTGCATCCGAAAGAAGGCG 630144 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||||| |||||| | ||| | |||| |||| |||| || || || Sbjct 630143 GATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGCT 630084 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 |||||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||| Sbjct 630083 TTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAAG 630024 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || ||| |||||| ||||||||||| | || |||||| Sbjct 630023 AAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGGGT 629964 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || |||| || |||||||| || ||| || Sbjct 629963 CTTCACACCGACTTTGCCTGTCTCCTCCAC 629934 >seq180 Length=606450 Score = 156 bits (172), Expect = 8e-33 Identities = 708/1103 (64%), Gaps = 51/1103 (5%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| ||||| |||||| || ||| | ||||| || Sbjct 290934 GTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCAGG 290876 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || || | ||| Sbjct 290875 AGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACCAAGACC 290816 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | || || ||| | || || || ||||||| Sbjct 290815 AATGGGTCGGTGACGCATGTTGCTGTTACGA--GCCTCTTGGACAGGGTAGTGGTTGACG 290758 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | || | | ||||| | |||||| |||||||| | Sbjct 290757 TCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAG 290698 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 | | | ||| | | | | || || | |||| | || | | | | Sbjct 290697 TCGTAG--CAAG-CATCTTCATAGTTGATG---------AAAGAGGGCAGAGACAAGGAG 290650 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| || | | || | |||||||| || || ||| Sbjct 290649 GCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGG 290590 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTT 221832 ||| || |||||| || |||| || || ||| |||||||||| ||| | ||||| Sbjct 290589 TTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTG-CAGTGATCCTT 290531 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| || || || ||||| ||| ||| | ||||| || ||| || | Sbjct 290530 GTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCT- 290472 Query 221893 TCTG-GCGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945 |||| || | | | | | ||| | | | |||| |||||| ||| Sbjct 290471 TCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTAC------- 290419 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | |||| | |||||||| || | ||||| || || | || |||| Sbjct 290418 AGAGCCT--CAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACA 290361 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | ||| |||| | ||| ||| | ||| | || |||||| || || |||||||| || Sbjct 290360 TGAGAGTCCATTCGCCGTT-TCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGA 290302 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124 || || || || | | || ||||||| |||| || || | ||||| | Sbjct 290301 GCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCAAGG 290242 Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184 ||||| || | ||| |||||||| ||||| || |||| ||| | || || ||||||||| Sbjct 290241 AACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTG 290182 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 || |||||||| | || | | ||| | |||||| | || || | || || | Sbjct 290181 TTACCACCCTGGT-CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 290123 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACT 222300 |||||||| ||| ||||| || ||||| | || ||| | | ||| Sbjct 290122 ACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGT---G 290066 Query 222301 GGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 ||| || ||| |||||||| || || || |||||||| || ||||||| || || Sbjct 290065 GGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATC 290006 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| || || || ||||||||| | | | || || || || || | ||||| Sbjct 290005 GTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGG 289946 Query 222421 TTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | ||||| || |||||| || | ||||| || || || || ||| | || ||| Sbjct 289945 CT--GTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGAC 289888 Query 222479 ATCAGATCGTACGTCTCTACGAC 222501 || || | ||| ||||| | ||| Sbjct 289887 ATGAGGTTGTATGTCTCCAAGAC 289865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841467769280