Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq180 196 6e-45 seq119 93.3 5e-14 >seq180 Length=606450 Score = 196 bits (216), Expect = 6e-45 Identities = 1039/1637 (63%), Gaps = 43/1637 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| | ||| ||||||| ||||| | || ||| || || || ||||| ||| Sbjct 289807 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 289866 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 ||||||||||||| || ||||| |||| | | ||| ||| |||| || || | Sbjct 289867 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCT--TCACTCATGCAAGCCCCACTTTA 289924 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||| || ||||| ||| || ||| | || ||||||||| | | | |||||| Sbjct 289925 TTCAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAG 289984 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | |||||||| | || || | | ||||| || || ||| |||| Sbjct 289985 GACAGCATTGATGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCT 290044 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| || || ||| | | |||| | ||| || || || Sbjct 290045 GGTGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACC 290104 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||||| || | ||||| |||| ||||| || || || ||| ||| || || || Sbjct 290105 AATGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTAC 290164 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622 || | || ||| || |||| | || || |||| ||||| | || |||||| Sbjct 290165 GTTGACCA---GGGTGGTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGG 290221 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | ||||||||||| | ||| || || ||| | || |||| || Sbjct 290222 CACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAGGAGGTCCGC 290281 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | || || || | | | || ||||| || || |||||||||||||| || ||| Sbjct 290282 GCTCGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 290341 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 || ||||| |||| | || || || || || || || || | ||| || Sbjct 290342 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 290400 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGT-AGAGCCAATGCGACT 75859 ||| || ||||| || || ||| |||||| || ||| |||||| || | | || | | Sbjct 290401 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGA-GAGGGTAAGGGTC---GCAAGT 290456 Query 75860 GTA-CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || | || | | || | ||||| | || ||||| | | ||||| ||||| |||| | Sbjct 290457 CTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACC 290516 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | ||||| ||||||||| || || ||||||||||||||||| | || || | Sbjct 290517 CTTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGTAACCAAAAGAACCTTGGTACCA 290576 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 || ||||| || || ||||| || || | || ||| | |||||| |||| Sbjct 290577 TCCGAAGCTCCAACCTGTGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTG 290636 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094 ||||||| | || || | | || || | ||| ||||||| || || | Sbjct 290637 TTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTATGAAGATGCTTGC---T 290693 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 || | | || || || || |||| | | ||| | ||| | ||| ||| Sbjct 290694 ACGACTTCAAGAAGCTGCACGAGGTCACTCAAGTCGTTGTCCGCAATTTGAACAAGATCA 290753 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | ||| || || || || | || || || || ||||| ||| |||| | Sbjct 290754 TCGACGTCAACCACTACCCTGTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCA 290813 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATT 76274 ||||| | ||||| |||||||| || |||| || || |||| | ||||| | Sbjct 290814 TTGGTCTTGGTGTGCAAGGTCTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGT 290873 Query 76275 CAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGG 76334 | ||| || ||| |||| | ||||| || ||||| || ||||| |||| Sbjct 290874 CTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTA 290933 Query 76335 AGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCC 76393 || |||| || | ||| | | ||||| |||| || || |||| || || Sbjct 290934 CTACG-TCTGTGCAACTCGCTAAGGAGGAAGGTCCCTACTCCACCTTCAAGGGCTCCCCT 290992 Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACG 76451 || || | || | || ||||| || |||| |||| || || || || | | | | Sbjct 290993 GCCTCTGAGGGTATTCTCCAGTTCGACATGT-GGAATGTCAAGCC-CTCTGACCTTTGGG 291050 Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511 ||||||| ||| || ||||| | ||| | || |||||||| | | | Sbjct 291051 ACTGGGAACCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTG 291110 Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571 | || ||||| || ||| || | || || | || || || ||||||||||| || | Sbjct 291111 CTCCTATGCCTACCGCCAGTACTTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTT 291170 Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631 |||| | |||||||||| | || ||| || || ||||| |||||||| Sbjct 291171 ACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCT 291230 Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA--- 76688 || |||| || || | || ||||| |||||| | | ||||||| | | || Sbjct 291231 GGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCA 291290 Query 76689 -TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747 || ||| | | ||||| || || || ||| | | ||||| | || |||||| | Sbjct 291291 TTGCTGATAAC----GGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCT 291346 Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807 || ||| || |||||||| || | | | || | | ||||| || || ||| Sbjct 291347 CTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCTGACCGT 291406 Query 76808 GGTCGCTTCATTGATCA 76824 ||| |||||||||||| Sbjct 291407 GGTGCCTTCATTGATCA 291423 >seq119 Length=1526710 Score = 93.3 bits (102), Expect = 5e-14 Identities = 299/457 (65%), Gaps = 21/457 (5%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || |||| ||| |||| ||||| || ||||||||||||||| ||| | | Sbjct 630106 CCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCT 630047 Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | ||| | || | ||| | |||||||| || |||||||| || || |||| || || Sbjct 630046 T-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAAC 629988 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || ||||| || ||||||||||| ||| || |||||| || ||| || | || Sbjct 629987 GAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGCC-TG--TCTCCTCCACTCT 629931 Query 65248 TTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304 | || ||| ||| | | | ||||| | ||| | | || || ||| Sbjct 629930 CACCTCAAGGGACGTGCCAGCAAACAGATGATCCAGGACATTATCACCGATGCCGTTTCT 629871 Query 65305 ATTGAGAAAGGGTTCATCTT--GGACGCACTCCCATGTAATCTCATCGGTATGAACTCTG 65362 |||||| | | ||| |||| || || ||||| ||| || |||| |||||||| Sbjct 629870 ATTGAGCAGGAGTT--TCTTACTGAGGCTCTCCCTTGTGCCCTGCTCGGCATGAACTCCA 629813 Query 65363 AGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGC 65422 | ||| ||||||| || | || | |||||||||||| |||| | Sbjct 629812 ACCTCATGAAGCAGTACATCGAATTCGTCGCTGATCGTCTCCTC------GTTGCTCTCG 629759 Query 65423 CACCCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATG 65479 | | | || | | || || || ||||| ||||| ||||| ||||| | Sbjct 629758 NNGAGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCG 629699 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | || ||||||||||| |||||||| |||| ||||| Sbjct 629698 GCAAAACCAACTTCTTCGAGAAGCGCGTTGCTGACTA 629662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567459806560