Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq267 89.7 9e-13
>seq267
Length=334782
Score = 89.7 bits (98), Expect = 9e-13
Identities = 162/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| | | || || || || || | || | ||| || || ||
Sbjct 143310 AATTTGCATACCACCACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTT 143369
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|||||||| | || | ||| || | || || ||||| ||||| |||| ||| ||
Sbjct 143370 GTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTG 143429
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||||||||| || || || || || || || |||| || | || |||||||| ||
Sbjct 143430 ATCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATAGTATCAGA 143489
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || || ||||| || || || | || || || || || |||||
Sbjct 143490 TGACTCAACCTCGAGGGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 143546
Score = 84.2 bits (92), Expect = 4e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
||||| ||||| || | || | || || || || |||||||| | |||| |
Sbjct 143050 CGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCG 143109
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | || || ||||| ||||| |||| ||| ||||||||||| || || || ||
Sbjct 143110 TCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATACCCTCCTTG 143169
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| || | ||| ||||| ||||| ||||| || || || || |||
Sbjct 143170 TCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATA 143229
Query 193326 GTTTTACCTGT 193336
|| || || ||
Sbjct 143230 GTCTTGCCGGT 143240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899651172489840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |