Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq180 143 2e-29 seq267 104 2e-17 >seq180 Length=606450 Score = 143 bits (158), Expect = 2e-29 Identities = 417/632 (66%), Gaps = 19/632 (3%) Strand=Plus/Minus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 ||||||||||||||| || | || ||| ||||||||| ||||| ||| | | || Sbjct 290434 CTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 290375 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | || ||| |||||||| | |||| ||||||| || ||| ||| ||||||| ||||| Sbjct 290374 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 290315 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 || ||||| | ||| || | || || || || || ||| | || || | | Sbjct 290314 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTA-CCGTGATTC- 290257 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 |||| | | |||||| || || ||||| ||||||||||| || || |||||||| | Sbjct 290256 TTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAG 290197 Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||| ||||| || || |||| || ||| || ||||| || ||| Sbjct 290196 GCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGC 290137 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652 | ||| || | | |||| | | || || ||||| || | | | | | | || Sbjct 290136 AGCATGGGAACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGT---- 290081 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| || | || | ||| || || || | | ||||| || | | || Sbjct 290080 GGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACA 290021 Query 139713 A-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771 | || | | || ||||| ||||| |||||||| |||| ||| || || |||| Sbjct 290020 AGTCTTG-AGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGC 289962 Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831 |||| ||||| || || || || ||||| || | ||| || || || || |||| Sbjct 289961 ATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA 289902 Query 139832 A-CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890 | | ||| || ||||| | | ||| || || | | | | | ||||||| || | Sbjct 289901 AGAACTTGCTT-GACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAG 289843 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTG 139922 || || |||| ||||||||| | |||||| || Sbjct 289842 ATTCCAACAGCGACTCGCATGATCATATGCTG 289811 >seq267 Length=334782 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || | ||||| || |||||||| ||||| || || | Sbjct 143549 ACCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCA 143490 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | || | || || |||||||| ||||| || || || ||||| ||| Sbjct 143489 TCTGATACTATCGACAACGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGAT 143430 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || ||||| || ||||| |||||| | | | | || || || Sbjct 143429 CAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 143370 Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| ||||| || ||| Sbjct 143369 AACATCCAGAAGGAGTCGACTCTCCAC 143343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895985992360