Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq180 214 2e-50
seq119 93.3 5e-14
>seq180
Length=606450
Score = 214 bits (236), Expect = 2e-50
Identities = 1008/1583 (64%), Gaps = 41/1583 (3%)
Strand=Plus/Minus
Query 110524 AATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTG 110583
||| ||||| || || || ||| |||||| || | ||||| | | ||| |||||
Sbjct 291370 AATCTCCCACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTG 291311
Query 110584 GATGGAACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAA 110639
||| ||||| | ||| || || | | ||||||| | | |||||| ||||| |
Sbjct 291310 GATAGAACC----GTTATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCA 291255
Query 110640 TCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTC 110699
| | || || |||| || |||||||| ||||| || || ||| ||
Sbjct 291254 TGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTC 291195
Query 110700 TTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTG 110759
| |||||||||| | ||||| || ||||||||||| || || || | || || |
Sbjct 291194 GGCGTTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCG 291135
Query 110760 CGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGA 110819
|| ||| || ||||| || || | | |||||||| || | ||| | |||||
Sbjct 291134 AAGTACTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGA 291075
Query 110820 TGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTC 110877
|| ||| |||||||| | | | || || || || |||| |||||||
Sbjct 291074 CATCCTCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG-GGCTTGACATTCC-ACATGTC 291017
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
||||| || | || | || || || || |||| ||||| |||| ||||| |
Sbjct 291016 GAACTGGAGAATACCCTCAGAGGCAGGGGAGCCCTTGAAGGTGGAGTAGGGACCTTCCTC 290957
Query 110938 TTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAG 110996
| ||| | || ||||| || |||| ||||| || ||||| || ||||| |
Sbjct 290956 CTTAGCGAGTTGCACAGA-CGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCT 290898
Query 110997 CATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCG 111056
|||| ||| || ||| || ||||| | |||| || || |||| |
Sbjct 290897 TGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAG 290838
Query 111057 CGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT 111116
| |||||||| ||||| | |||||| |||| ||| ||||| || || || || |
Sbjct 290837 CAAGACCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTT 290778
Query 111117 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
|| || || || ||| |||| ||| | ||| | ||| | | ||||
Sbjct 290777 GGACAGGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACGACTTGAGTGA 290718
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT---TGACATACTTTGGAA 111233
|| || || || | | || | || || ||||||| ||| | || |
Sbjct 290717 CCTCGTGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAGGGCA 290661
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
| | | || || | ||||||||||| |||||| | ||| || | || |
Sbjct 290660 GAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCT 290601
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| || || | |||||| || || || || | ||||||||||||||||| ||||
Sbjct 290600 CAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTACTCTTGCGATTGC 290541
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||||||||||| | || | || ||||| ||||| | | ||||| || |
Sbjct 290540 AGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGT 290481
Query 111414 TCCAAA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTG 111470
||||| | || | | || | || | | ||| ||| | ||||| ||||||||||
Sbjct 290480 ACCAAAGCTTCTGAGCCTTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTTT 290424
Query 111471 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGA 111529
||| || || ||||| || ||||| ||| | || || || || || || ||
Sbjct 290423 CGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGG 290365
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
|| | |||| ||||| || | ||| || |||||||||||||| || || |||||
Sbjct 290364 CACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAA 290305
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
|| | | | || || || | | || |||| || | ||| || || ||| | |||
Sbjct 290304 AGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGATTCTTTCGGAGATCA 290245
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCC 111703
|||||||| | || || ||||||||||||||||| |||| |||| || || |
Sbjct 290244 AGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGC 290185
Query 111704 TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 111763
|| | ||| | || | || || || || ||| ||| || || || ||||| |||
Sbjct 290184 TTGTTA---CCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGA 290128
Query 111764 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 111823
| ||||| | || |||||| || || || ||| | |||| | |
Sbjct 290127 ACGATACCGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGG 290068
Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883
||| || || |||||||| |||||| ||| || || ||||| | | || ||
Sbjct 290067 TGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTA 290008
Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943
| |||||||| | || ||||||||| | | | ||||||||| || | |||
Sbjct 290007 TCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGA 289948
Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GG 112001
|| ||| ||||| || ||||| | || || |||| ||| ||| | | |||| |
Sbjct 289947 GGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTG 289890
Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061
|||| || |||||||||||||||| ||||| || || || ||| || | ||||
Sbjct 289889 ACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGA 289830
Query 112062 CCCGCATGAACATGTACTGTGGG 112084
| ||||||| ||| | ||| |||
Sbjct 289829 CTCGCATGATCATATGCTGCGGG 289807
>seq119
Length=1526710
Score = 93.3 bits (102), Expect = 5e-14
Identities = 329/504 (65%), Gaps = 23/504 (5%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| | || |||||||| ||||||||||| || || ||||| ||||| |||||
Sbjct 629662 TAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTTTTGCCGCCAAGGGAGATGTTCTCCATG 629721
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGGTGGCACCCCAACTTGTTTGAGGAGA 122487
||||| || || || | | || | | | | |||| |||||||
Sbjct 629722 AAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCNNCGAGAGCAAC------GAGGAGA 629775
Query 122488 CGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTA 122547
||||| | || | || ||||||| ||| | |||||||| |||| ||| |
Sbjct 629776 CGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCA 629835
Query 122548 CATGGGAGTGCGTCC--AAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
|| ||||| || || |||| ||| | | |||||| ||| || || | | |||
Sbjct 629836 CAAGGGAGAGCCTCAGTAAGA--AACTCCTGCTCAATAGAAACGGCATCGGTGATAATGT 629893
Query 122606 CGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 122662
| ||||| | | | ||| ||| || | || | || ||| || |||||
Sbjct 629894 CCTGGATCATCTGTTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGA--CA-GGCAA 629950
Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722
| || ||| ||||||||||| || ||||| || || || || |||| ||||| ||||
Sbjct 629951 AGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGACCAGGCA 630010
Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 122781
|||| || |||||||| | ||| | || | ||| || | ||| |||||||||||||
Sbjct 630011 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCACCGCTGAAGAAGATACCC 630069
Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAACCA 122840
|| || ||||| |||| ||| || | || |||| || | ||| | | | |||
Sbjct 630070 TCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAG-TTCTTATCCTGGATCCA 630128
Query 122841 TTTCATTGCCCATTTCGCCTTCTT 122864
| || ||||| | |||||||||
Sbjct 630129 TCGGATGGCCCAATCCGCCTTCTT 630152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029746935200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |